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Author |
Folgado, M.G.; Sanz, V. |
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Title |
Exploring the political pulse of a country using data science tools |
Type |
Journal Article |
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Year |
2022 |
Publication |
Journal of Computational Social Science |
Abbreviated Journal |
J. Comput. Soc. Sci. |
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Volume |
5 |
Issue  |
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Pages |
987-1000 |
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Keywords |
Politics; Spain; Sentiment analysis; Artificial Intelligence; Machine learning; Neural networks; Natural Language Processing (NLP) |
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Abstract |
In this paper we illustrate the use of Data Science techniques to analyse complex human communication. In particular, we consider tweets from leaders of political parties as a dynamical proxy to political programmes and ideas. We also study the temporal evolution of their contents as a reaction to specific events. We analyse levels of positive and negative sentiment in the tweets using new tools adapted to social media. We also train a Fully-Connected Neural Network (FCNN) to recognise the political affiliation of a tweet. The FCNN is able to predict the origin of the tweet with a precision in the range of 71-75%, and the political leaning (left or right) with a precision of around 90%. This study is meant to be viewed as an example of how to use Twitter data and different types of Data Science tools for a political analysis. |
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Address |
[Folgado, Miguel G.; Sanz, Veronica] Univ Valencia, Inst Fis Corpuscular IFIC, CSIC, Valencia 46980, Spain, Email: migarfol@upvnet.upv.es; |
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2432-2717 |
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Notes |
WOS:000742263500002 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
5077 |
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Author |
Valdes-Cortez, C.; Niatsetski, Y.; Perez-Calatayud, J.; Ballester, F.; Vijande, J. |
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Title |
A Monte Carlo study of the relative biological effectiveness in surface brachytherapy |
Type |
Journal Article |
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Year |
2022 |
Publication |
Medical Physics |
Abbreviated Journal |
Med. Phys. |
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Volume |
49 |
Issue |
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Pages |
5576-5588 |
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Keywords |
Monte Carlo; relative biological effectiveness; surface HDR brachytherapy |
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Abstract |
Purpose This work aims to simulate clustered DNA damage from ionizing radiation and estimate the relative biological effectiveness (RBE) for radionuclide (rBT)- and electronic (eBT)-based surface brachytherapy through a hybrid Monte Carlo (MC) approach, using realistic models of the sources and applicators. Methods Damage from ionizing radiation has been studied using the Monte Carlo Damage Simulation algorithm using as input the primary electron fluence simulated using a state-of-the-art MC code, PENELOPE-2018. Two Ir-192 rBT applicators, Valencia and Leipzig, one Co-60 source with a Freiburg Flap applicator (reference source), and two eBT systems, Esteya and INTRABEAM, have been included in this study implementing full realizations of their geometries as disclosed by the manufacturer. The role played by filtration and tube kilovoltage has also been addressed. Results For rBT, an RBE value of about 1.01 has been found for the applicators and phantoms considered. In the case of eBT, RBE values for the Esteya system show an almost constant RBE value of about 1.06 for all depths and materials. For INTRABEAM, variations in the range of 1.12-1.06 are reported depending on phantom composition and depth. Modifications in the Esteya system, filtration, and tube kilovoltage give rise to variations in the same range. Conclusions Current clinical practice does not incorporate biological effects in surface brachytherapy. Therefore, the same absorbed dose is administered to the patients independently on the particularities of the rBT or eBT system considered. The almost constant RBE values reported for rBT support that assumption regardless of the details of the patient geometry, the presence of a flattening filter in the applicator design, or even significant modifications in the photon energy spectra above 300 keV. That is not the case for eBT, where a clear dependence on the eBT system and the characteristics of the patient geometry are reported. A complete study specific for each eBT system, including detailed applicator characteristics (size, shape, filtering, among others) and common anatomical locations, should be performed before adopting an existing RBE value. |
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[Valdes-Cortez, Christian] Hosp Reg Antofagasta, Nucl Med Dept, Antofagasta, Chile, Email: cvalcort@gmail.com |
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Wiley |
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0094-2405 |
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Notes |
WOS:000811709400001 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
5262 |
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Author |
Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Bhattacharyya, S.; Caron, S.; Johannesson, G.; Ruiz de Austri, R.; van den Oetelaar, C.; Zaharijas, G.; Groot, P.J.; Cator, E.; Nelemans, G. |
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Title |
AutoSourceID-Light Fast optical source localization via U-Net and Laplacian of Gaussian |
Type |
Journal Article |
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Year |
2022 |
Publication |
Astronomy & Astrophysics |
Abbreviated Journal |
Astron. Astrophys. |
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Volume |
662 |
Issue |
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Pages |
A109 - 8pp |
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Keywords |
astronomical databases; miscellaneous; methods; data analysis; stars; imaging; techniques; image processing |
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Abstract |
Aims. With the ever-increasing survey speed of optical wide-field telescopes and the importance of discovering transients when they are still young, rapid and reliable source localization is paramount. We present AutoSourceID-Light (ASID-L), an innovative framework that uses computer vision techniques that can naturally deal with large amounts of data and rapidly localize sources in optical images. Methods. We show that the ASID-L algorithm based on U-shaped networks and enhanced with a Laplacian of Gaussian filter provides outstanding performance in the localization of sources. A U-Net network discerns the sources in the images from many different artifacts and passes the result to a Laplacian of Gaussian filter that then estimates the exact location. Results. Using ASID-L on the optical images of the MeerLICHT telescope demonstrates the great speed and localization power of the method. We compare the results with SExtractor and show that our method outperforms this more widely used method. ASID-L rapidly detects more sources not only in low- and mid-density fields, but particularly in areas with more than 150 sources per square arcminute. The training set and code used in this paper are publicly available. |
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Address |
[Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Groot, P. J.; Nelemans, G.] Radboud Univ Nijmegen, Dept Astrophys, IMAPP, POB 9010, NL-6500 GL Nijmegen, Netherlands, Email: f.stoppa@astro.ru.nl |
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Edp Sciences S A |
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English |
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0004-6361 |
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Notes |
WOS:000818665600009 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
5291 |
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Author |
SCiMMA and SNEWS Collaborations (Baxter, A.L. et al); Colomer, M. |
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Title |
Collaborative experience between scientific software projects using Agile Scrum development |
Type |
Journal Article |
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Year |
2022 |
Publication |
Software-Practice & Experience |
Abbreviated Journal |
Softw.-Pract. Exp. |
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Volume |
52 |
Issue |
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Pages |
2077-2096 |
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Keywords |
Agile; cyberinfrastructure; multimessenger astrophysics; scientific computing; software development |
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Abstract |
Developing sustainable software for the scientific community requires expertise in software engineering and domain science. This can be challenging due to the unique needs of scientific software, the insufficient resources for software engineering practices in the scientific community, and the complexity of developing for evolving scientific contexts. While open-source software can partially address these concerns, it can introduce complicating dependencies and delay development. These issues can be reduced if scientists and software developers collaborate. We present a case study wherein scientists from the SuperNova Early Warning System collaborated with software developers from the Scalable Cyberinfrastructure for Multi-Messenger Astrophysics project. The collaboration addressed the difficulties of open-source software development, but presented additional risks to each team. For the scientists, there was a concern of relying on external systems and lacking control in the development process. For the developers, there was a risk in supporting a user-group while maintaining core development. These issues were mitigated by creating a second Agile Scrum framework in parallel with the developers' ongoing Agile Scrum process. This Agile collaboration promoted communication, ensured that the scientists had an active role in development, and allowed the developers to evaluate and implement the scientists' software requirements. The collaboration provided benefits for each group: the scientists actuated their development by using an existing platform, and the developers utilized the scientists' use-case to improve their systems. This case study suggests that scientists and software developers can avoid scientific computing issues by collaborating and that Agile Scrum methods can address emergent concerns. |
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Address |
[Baxter, Amanda L.; Clark, Michael; Kopec, Abigail; Lang, Rafael F.; Li, Shengchao; Linvill, Mark W.; Milisavljevic, Danny; Weil, Kathryn E.] Purdue Univ, Dept Phys & Astron, W Lafayette, IN 47907 USA, Email: adepoian@purdue.edu; |
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Wiley |
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English |
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ISSN |
0038-0644 |
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Notes |
WOS:000830363800001 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
5305 |
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Author |
Hueso-Gonzalez, F.; Casaña Copado, J.V.; Fernandez Prieto, A.; Gallas Torreira, A.; Lemos Cid, E.; Ros Garcia, A.; Vazquez Regueiro, P.; Llosa, G. |
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Title |
A dead-time-free data acquisition system for prompt gamma-ray measurements during proton therapy treatments |
Type |
Journal Article |
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Year |
2022 |
Publication |
Nuclear Instruments & Methods in Physics Research A |
Abbreviated Journal |
Nucl. Instrum. Methods Phys. Res. A |
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Volume |
1033 |
Issue |
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Pages |
166701 - 9pp |
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Keywords |
Data acquisition; Dead time; Pile-up; Digital signal processing |
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Abstract |
In cancer patients undergoing proton therapy, a very intense secondary radiation is produced during the treatment, which lasts around one minute. About one billion prompt gamma-rays are emitted per second, and their detection with fast scintillation detectors is useful for monitoring a correct beam delivery. To cope with the expected count rate and pile-up, as well as the scarce statistics due to the short treatment duration, we developed an eidetic data acquisition system capable of continuously digitizing the detector signal with a high sampling rate and without any dead time. By streaming the fully unprocessed waveforms to the computer, complex pile-up decomposition algorithms can be applied and optimized offline. We describe the data acquisition architecture and the multiple experimental tests designed to verify the sustained data throughput speed and the absence of dead time. While the system is tailored for the proton therapy environment, the methodology can be deployed in any other field requiring the recording of raw waveforms at high sampling rates with zero dead time. |
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Elsevier |
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English |
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ISSN |
0168-9002 |
ISBN |
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Notes |
WOS:000794040600002 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
no |
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Call Number |
IFIC @ pastor @ |
Serial |
5318 |
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Author |
NEXT Collaboration (Jones, B.J.P. et al); Carcel, S.; Carrion, J.V.; Diaz, J.; Martin-Albo, J.; Martinez, A.; Martinez-Vara, M.; Muñoz Vidal, J.; Novella, P.; Palmeiro, B.; Querol, M.; Romo-Luque, C.; Sorel, M.; Uson, A.; Yahlali, N. |
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Title |
The dynamics of ions on phased radio-frequency carpets in high pressure gases and application for barium tagging in xenon gas time projection chambers |
Type |
Journal Article |
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Year |
2022 |
Publication |
Nuclear Instruments & Methods in Physics Research A |
Abbreviated Journal |
Nucl. Instrum. Methods Phys. Res. A |
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Volume |
1039 |
Issue |
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Pages |
167000 - 19pp |
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Keywords |
RF carpets; Ion transport; Neutrinoless double beta decay; Barium tagging |
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Abstract |
Radio-frequency (RF) carpets with ultra-fine pitches are examined for ion transport in gases at atmospheric pressures and above. We develop new analytic and computational methods for modeling RF ion transport at densities where dynamics are strongly influenced by buffer gas collisions. An analytic description of levitating and sweeping forces from phased arrays is obtained, then thermodynamic and kinetic principles are used to calculate ion loss rates in the presence of collisions. This methodology is validated against detailed microscopic SIMION simulations. We then explore a parameter space of special interest for neutrinoless double beta decay experiments: transport of barium ions in xenon at pressures from 1 to 10 bar. Our computations account for molecular ion formation and pressure dependent mobility as well as finite temperature effects. We discuss the challenges associated with achieving suitable operating conditions, which lie beyond the capabilities of existing devices, using presently available or near-future manufacturing techniques. |
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Address |
[Hauptman, J.] Iowa State Univ, Dept Phys & Astron, Ames, IA 50011 USA, Email: ben.jones@uta.edu |
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Elsevier |
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English |
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ISSN |
0168-9002 |
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Conference |
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Notes |
WOS:000861747900008 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
5372 |
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Author |
Araujo Filho, A.A.; Zare, S.; Porffrio, P.J.; Kriz, J.; Hassanabadi, H. |
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Title |
Thermodynamics and evaporation of a modified Schwarzschild black hole in a non-commutative gauge theory |
Type |
Journal Article |
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Year |
2023 |
Publication |
Physics Letters B |
Abbreviated Journal |
Phys. Lett. B |
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Volume |
838 |
Issue |
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Pages |
137744 - 9pp |
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Keywords |
Thermodynamic properties; Black hole; Non-commutative gauge theory; Evaporation process |
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Abstract |
In this work, we study the thermodynamic properties on a non-commutative background via gravitational gauge field potentials. This procedure is accomplished after contracting de Sitter (dS) group, SO(4, 1), with the Poincare group, ISO(3, 1). Particularly, we focus on a static spherically symmetric black hole. In this manner, we calculate the modified Hawking temperature and the other deformed thermal state quantities, namely, entropy, heat capacity, Helmholtz free energy and pressure. Finally, we also investigate the black hole evaporation process in such a context. |
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Address |
[Araujo Filho, A. A.] Univ Valencia, Dept Fis Teor, Burjassot 46100, Valencia, Spain, Email: dilto@fisica.ufc.br; |
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Elsevier |
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English |
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ISSN |
0370-2693 |
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Notes |
WOS:000935398000001 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
5483 |
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Author |
Abele, H. et al; Algora, A.; Gonzalez-Alonso, M.; Novella, P. |
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Title |
Particle physics at the European Spallation Source |
Type |
Journal Article |
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Year |
2023 |
Publication |
Physics Reports |
Abbreviated Journal |
Phys. Rep. |
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Volume |
1023 |
Issue |
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Pages |
1-84 |
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Keywords |
ESS; Neutrons; NNBAR; ESSnuSB; nEDM |
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Abstract |
Presently under construction in Lund, Sweden, the European Spallation Source (ESS) will be the world's brightest neutron source. As such, it has the potential for a particle physics program with a unique reach and which is complementary to that available at other facilities. This paper describes proposed particle physics activities for the ESS. These encompass the exploitation of both the neutrons and neutrinos produced at the ESS for high precision (sensitivity) measurements (searches). |
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Address |
[Fynbo, H. O. U.; Uggerhoj, U. I.] Aarhus Univ, Dept Phys & Astron, Aarhus, Denmark, Email: milstead@fysik.su.se |
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Elsevier |
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English |
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ISSN |
0370-1573 |
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Notes |
WOS:001063474900001 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
5685 |
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Author |
Stoppa, F.; Ruiz de Austri, R.; Vreeswijk, P.; Bhattacharyya, S.; Caron, S.; Bloemen, S.; Zaharijas, G.; Principe, G.; Vodeb, V.; Groot, P.J.; Cator, E.; Nelemans, G. |
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Title |
AutoSourceID-FeatureExtractor Optical image analysis using a two-step mean variance estimation network for feature estimation and uncertainty characterisation |
Type |
Journal Article |
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Year |
2023 |
Publication |
Astronomy & Astrophysics |
Abbreviated Journal |
Astron. Astrophys. |
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Volume |
680 |
Issue |
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Pages |
A108 - 14pp |
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Keywords |
astronomical databases: miscellaneous; methods: data analysis; stars: imaging; techniques: image processing |
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Abstract |
Aims. In astronomy, machine learning has been successful in various tasks such as source localisation, classification, anomaly detection, and segmentation. However, feature regression remains an area with room for improvement. We aim to design a network that can accurately estimate sources' features and their uncertainties from single-band image cutouts, given the approximated locations of the sources provided by the previously developed code AutoSourceID-Light (ASID-L) or other external catalogues. This work serves as a proof of concept, showing the potential of machine learning in estimating astronomical features when trained on meticulously crafted synthetic images and subsequently applied to real astronomical data.Methods. The algorithm presented here, AutoSourceID-FeatureExtractor (ASID-FE), uses single-band cutouts of 32x32 pixels around the localised sources to estimate flux, sub-pixel centre coordinates, and their uncertainties. ASID-FE employs a two-step mean variance estimation (TS-MVE) approach to first estimate the features and then their uncertainties without the need for additional information, for example the point spread function (PSF). For this proof of concept, we generated a synthetic dataset comprising only point sources directly derived from real images, ensuring a controlled yet authentic testing environment.Results. We show that ASID-FE, trained on synthetic images derived from the MeerLICHT telescope, can predict more accurate features with respect to similar codes such as SourceExtractor and that the two-step method can estimate well-calibrated uncertainties that are better behaved compared to similar methods that use deep ensembles of simple MVE networks. Finally, we evaluate the model on real images from the MeerLICHT telescope and the Zwicky Transient Facility (ZTF) to test its transfer learning abilities. |
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Address |
[Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Groot, P. J.; Nelemans, G.] Radboud Univ Nijmegen, Dept Astrophys, IMAPP, POB 9010, NL-6500 GL Nijmegen, Netherlands, Email: f.stoppa@astro.ru.nl |
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Publisher |
Edp Sciences S A |
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English |
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ISSN |
0004-6361 |
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Notes |
WOS:001131898100003 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
5887 |
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Author |
Stoppa, F.; Bhattacharyya, S.; Ruiz de Austri, R.; Vreeswijk, P.; Caron, S.; Zaharijas, G.; Bloemen, S.; Principe, G.; Malyshev, D.; Vodeb, V.; Groot, P.J.; Cator, E.; Nelemans, G. |
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Title |
AutoSourceID-Classifier Star-galaxy classification using a convolutional neural network with spatial information |
Type |
Journal Article |
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Year |
2023 |
Publication |
Astronomy & Astrophysics |
Abbreviated Journal |
Astron. Astrophys. |
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Volume |
680 |
Issue |
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Pages |
A109 - 16pp |
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Keywords |
methods: data analysis; techniques: image processing; astronomical databases: miscellaneous; stars: imaging; Galaxies: statistics |
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Abstract |
Aims. Traditional star-galaxy classification techniques often rely on feature estimation from catalogs, a process susceptible to introducing inaccuracies, thereby potentially jeopardizing the classification's reliability. Certain galaxies, especially those not manifesting as extended sources, can be misclassified when their shape parameters and flux solely drive the inference. We aim to create a robust and accurate classification network for identifying stars and galaxies directly from astronomical images.Methods. The AutoSourceID-Classifier (ASID-C) algorithm developed for this work uses 32x32 pixel single filter band source cutouts generated by the previously developed AutoSourceID-Light (ASID-L) code. By leveraging convolutional neural networks (CNN) and additional information about the source position within the full-field image, ASID-C aims to accurately classify all stars and galaxies within a survey. Subsequently, we employed a modified Platt scaling calibration for the output of the CNN, ensuring that the derived probabilities were effectively calibrated, delivering precise and reliable results.Results. We show that ASID-C, trained on MeerLICHT telescope images and using the Dark Energy Camera Legacy Survey (DECaLS) morphological classification, is a robust classifier and outperforms similar codes such as SourceExtractor. To facilitate a rigorous comparison, we also trained an eXtreme Gradient Boosting (XGBoost) model on tabular features extracted by SourceExtractor. While this XGBoost model approaches ASID-C in performance metrics, it does not offer the computational efficiency and reduced error propagation inherent in ASID-C's direct image-based classification approach. ASID-C excels in low signal-to-noise ratio and crowded scenarios, potentially aiding in transient host identification and advancing deep-sky astronomy. |
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Address |
[Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Groot, P. J.; Nelemans, G.] Radboud Univ Nijmegen, Dept Astrophys IMAPP, POB 9010, NL-6500 GL Nijmegen, Netherlands, Email: f.stoppa@astro.ru.nl |
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Edp Sciences S A |
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English |
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0004-6361 |
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WOS:001131898100001 |
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no |
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yes |
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yes |
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5888 |
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