Warnecke, S., Sevryuk, M. B., Ceperley, D. M., Toennies, J. P., Guardiola, R., & Navarro, J. (2010). The structure of para-hydrogen clusters. Eur. Phys. J. D, 56(3), 353–358.
Abstract: The path integral Monte Carlo calculated radial distributions of para-hydrogen clusters (p-H-2) N consisting of N = 4-40 molecules interacting via a Lennard-Jones potential at T = 1.5 K show evidence for additional peaks compared to radial distributions calculated by diffusion Monte Carlo (T = 0 K) and path integral Monte Carlo at T <= 0.5 K. The difference in structures is attributed to quantum delocalization at the lowest temperature. The new structures at finite temperatures appear to be consistent with classical structures calculated for an effective Morse potential, which in order to account for the large zero point energy, is substantially softer than the Lennard-Jones potential.
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CDF Collaboration(Aaltonen, T. et al), Cabrera, S., & Cuenca Almenar, C. (2010). Study of multi-muon events produced in p (p)over-bar interactions at root s=1.96 TeV. Eur. Phys. J. C, 68(1-2), 109–118.
Abstract: We report the results of a study of multi-muon events produced at the Fermilab Tevatron collider and acquired with the CDF II detector using a dedicated dimuon trigger. The production cross section and kinematics of events in which both muon candidates are produced inside the beam pipe of radius 1.5 cm are successfully modeled by known processes which include heavy flavor production. In contrast, we are presently unable to fully account for the number and properties of the remaining events, in which at least one muon candidate is produced outside of the beam pipe, in terms of the same understanding of the CDF II detector, trigger, and event reconstruction.
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Batist, L., Gorska, M., Grawe, H., Janas, Z., Kavatsyuk, M., Karny, M., et al. (2010). Systematics of Gamow-Teller beta decay “Southeast” of Sn-100. Eur. Phys. J. A, 46(1), 45–53.
Abstract: The energy centroids and integrated strengths of Gamow-Teller transitions in the beta(+) and electron-capture decay are analyzed for nuclei whose proton number Z and neutron number N are restricted to 44 <= Z <= 50 and 50 <= N <= 58. The analysis is based on data measured both with high-resolution gamma-ray spectrometry and total gamma-ray absorption techniques. The dependence of the considered quantities on the relative neutron excess are established after taking into account the effects due to the Coulomb interaction and mean-field level occupancies. An extrapolation of this dependence to the lightest known tin isotopes is used to estimate the decay characteristics of Sn-100 and Sn-101. The values extrapolated for the half-lives of Sn-100 and Sn-101 agree with experimental data. Using the extrapolated values together with shell model predictions, the Q values for the electron-capture decay of Sn-100 is evaluated. The quenching factor for beta(+) and the electron-capture decay of the nuclei under consideration here is established to be 0.56(2) with a possible weak dependence on N – Z.
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Sanjuan, R., Nebot, M., Chirico, N., Mansky, L. M., & Belshaw, R. (2010). Viral Mutation Rates. J. Virol., 84(19), 9733–9748.
Abstract: Accurate estimates of virus mutation rates are important to understand the evolution of the viruses and to combat them. However, methods of estimation are varied and often complex. Here, we critically review over 40 original studies and establish criteria to facilitate comparative analyses. The mutation rates of 23 viruses are presented as substitutions per nucleotide per cell infection (s/n/c) and corrected for selection bias where necessary, using a new statistical method. The resulting rates range from 10(-8) to 10(-6) s/n/c for DNA viruses and from 10(-6) to 10(-4) s/n/c for RNA viruses. Similar to what has been shown previously for DNA viruses, there appears to be a negative correlation between mutation rate and genome size among RNA viruses, but this result requires further experimental testing. Contrary to some suggestions, the mutation rate of retroviruses is not lower than that of other RNA viruses. We also show that nucleotide substitutions are on average four times more common than insertions/deletions (indels). Finally, we provide estimates of the mutation rate per nucleotide per strand copying, which tends to be lower than that per cell infection because some viruses undergo several rounds of copying per cell, particularly double-stranded DNA viruses. A regularly updated virus mutation rate data set will be available at www.uv.es/rsanjuan/virmut.
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Aguiar, P., Rafecas, M., Ortuño, J. E., Kontaxakis, G., Santos, A., Pavia, J., et al. (2010). Geometrical and Monte Carlo projectors in 3D PET reconstruction. Med. Phys., 37(11), 5691–5702.
Abstract: Purpose: In the present work, the authors compare geometrical and Monte Carlo projectors in detail. The geometrical projectors considered were the conventional geometrical Siddon ray-tracer (S-RT) and the orthogonal distance-based ray-tracer (OD-RT), based on computing the orthogonal distance from the center of image voxel to the line-of-response. A comparison of these geometrical projectors was performed using different point spread function (PSF) models. The Monte Carlo-based method under consideration involves an extensive model of the system response matrix based on Monte Carlo simulations and is computed off-line and stored on disk. Methods: Comparisons were performed using simulated and experimental data of the commercial small animal PET scanner rPET. Results: The results demonstrate that the orthogonal distance-based ray-tracer and Siddon ray-tracer using PSF image-space convolutions yield better images in terms of contrast and spatial resolution than those obtained after using the conventional method and the multiray-based S-RT. Furthermore, the Monte Carlo-based method yields slight improvements in terms of contrast and spatial resolution with respect to these geometrical projectors. Conclusions: The orthogonal distance-based ray-tracer and Siddon ray-tracer using PSF image-space convolutions represent satisfactory alternatives to factorizing the system matrix or to the conventional on-the-fly ray-tracing methods for list-mode reconstruction, where an extensive modeling based on Monte Carlo simulations is unfeasible.
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