Rodriguez-Alvarez, M. J., Sanchez, F., Soriano, A., Iborra, A., & Mora, C. (2011). Exploiting symmetries for weight matrix design in CT imaging. Math. Comput. Model., 54(7-8), 1655–1664.
Abstract: In this paper we propose several methods of constructing the system matrix (SM) of a Computed Tomography (CT) scanner with two objectives: (1) to construct SMs in the shortest possible time and store them in an ordinary PC without losing quality, (2) to analyze the possible applications of the proposed method to 3D, taking into account SMs' sizes, computing time and reconstructed image quality. In order to build the SM, we propose two new field of view (FOV) pixellation schemes, based on a polar coordinate system (polar grid) by taking advantage of the polar rotation symmetries of CT devices. Comparisons between the SMs proposed are performed using two phantom and a real CT-simulator images. Global error, contrast, noise and homogeneity of the reconstructed images are discussed.
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Mendez, V., Amoros, G., Garcia, F., & Salt, J. (2010). Emergent algorithms for replica location and selection in data grid. Futur. Gener. Comp. Syst., 26(7), 934–946.
Abstract: Grid infrastructures for e-Science projects are growing in magnitude terms. Improvements in data Grid replication algorithms may be critical in many of these infrastructures. This paper shows a decentralized replica optimization service, providing a general Emergent Artificial Intelligence (EAI) algorithm for the problem definition. Our aim is to set up a theoretical framework for emergent heuristics in Grid environments. Further, we describe two EAI approaches, the Particle Swarm Optimization PSO-Grid Multiswarm Federation and the Ant Colony Optimization ACO-Grid Asynchronous Colonies Optimization replica optimization algorithms, with some examples. We also present extended results with best performance and scalability features for PSO-Grid Multiswarrn Federation.
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Trbojevich, R. A., Fernandez, A., Watanabe, F., Mustafa, T., & Bryant, M. S. (2016). Comparative study of silver nanoparticle permeation using Side-Bi-Side and Franz diffusion cells. J. Nanopart. Res., 18(3), 55–12pp.
Abstract: Better understanding the mechanisms of nanoparticle permeation through membranes and packaging polymers has important implications for the evaluation of drug transdermal uptake, in food safety and the environmental implications of nanotechnology. In this study, permeation of 21 nm diameter silver nanoparticles (AgNPs) was tested using Side-Bi-Side and Franz static diffusion cells through hydrophilic 0.1 and 0.05 lm pore diameter 125 μm thick synthetic cellulose membranes, and 16 and 120 μm thick low-density polyethylene (LDPE) films. Experiments performed with LDPE films discarded permeation of AgNPs or Ag ions over the investigated time-frame in both diffusion systems. But controlled release of AgNPs has been quantified using semipermeable hydrophilic membranes. The permeation followed a quasi-linear time-dependent model during the experimental time-frame, which represents surface reaction-limited permeation. Diffusive flux, diffusion coefficients, and membrane permeability were determined as a function of pore size and diffusion model. Concentration gradient and pore size were key to understand mass transfer phenomena in the diffusion systems.
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Assam, I., Vijande, J., Ballester, F., Perez-Calatayud, J., Poppe, B., & Siebert, F. A. (2022). Evaluation of dosimetric effects of metallic artifact reduction and tissue assignment on Monte Carlo dose calculations for I-125 prostate implants. Med. Phys., 49, 6195–6208.
Abstract: Purpose Monte Carlo (MC) simulation studies, aimed at evaluating the magnitude of tissue heterogeneity in I-125 prostate permanent seed implant brachytherapy (BT), customarily use clinical post-implant CT images to generate a virtual representation of a realistic patient model (virtual patient model). Metallic artifact reduction (MAR) techniques and tissue assignment schemes (TAS) are implemented on the post-implant CT images to mollify metallic artifacts due to BT seeds and to assign tissue types to the voxels corresponding to the bright seed spots and streaking artifacts, respectively. The objective of this study is to assess the combined influence of MAR and TAS on MC absorbed dose calculations in post-implant CT-based phantoms. The virtual patient models used for I-125 prostate implant MC absorbed dose calculations in this study are derived from the CT images of an external radiotherapy prostate patient without BT seeds and prostatic calcifications, thus averting the need to implement MAR and TAS. Methods The geometry of the IsoSeed I25.S17plus source is validated by comparing the MC calculated results of the TG-43 parameters for the line source approximation with the TG-43U1S2 consensus data. Four MC absorbed dose calculations are performed in two virtual patient models using the egs_brachy MC code: (1) TG-43-based D-w,w-TG(43), (2) D-w,D-w-MBDC that accounts for interseed scattering and attenuation (ISA), (3) D-m,D-m that examines ISA and tissue heterogeneity by scoring absorbed dose in tissue, and (4) D-w,D-m that unlike D-m,D-m scores absorbed dose in water. The MC absorbed doses (1) and (2) are simulated in a TG-43 patient phantom derived by assigning the densities of every voxel to 1.00 g cm(-3) (water), whereas MC absorbed doses (3) and (4) are scored in the TG-186 patient phantom generated by mapping the mass density of each voxel to tissue according to a CT calibration curve. The MC absorbed doses calculated in this study are compared with VariSeed v8.0 calculated absorbed doses. To evaluate the dosimetric effect of MAR and TAS, the MC absorbed doses of this work (independent of MAR and TAS) are compared to the MC absorbed doses of different I-125 source models from previous studies that were calculated with different MC codes using post-implant CT-based phantoms generated by implementing MAR and TAS on post-implant CT images. Results The very good agreement of TG-43 parameters of this study and the published consensus data within 3% validates the geometry of the IsoSeed I25.S17plus source. For the clinical studies, the TG-43-based calculations show a D-90 overestimation of more than 4% compared to the more realistic MC methods due to ISA and tissue composition. The results of this work generally show few discrepancies with the post-implant CT-based dosimetry studies with respect to the D-90 absorbed dose metric parameter. These discrepancies are mainly Type B uncertainties due to the different I-125 source models and MC codes. Conclusions The implementation of MAR and TAS on post-implant CT images have no dosimetric effect on the I-125 prostate MC absorbed dose calculation in post-implant CT-based phantoms.
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ATLAS Collaboration(Aad, G. et al), Amoros, G., Cabrera Urban, S., Castillo Gimenez, V., Costa, M. J., Escobar, C., et al. (2010). Charged-particle multiplicities in pp interactions at root s=900 GeV measured with the ATLAS detector at the LHC. Phys. Lett. B, 688(1), 21–42.
Abstract: The first measurements from proton-proton collisions recorded with the ATLAS detector at the LHC are presented. Data were collected in December 2009 using a minimum-bias trigger during collisions at a centre-of-mass energy of 900 GeV. The charged-particle multiplicity, its dependence on transverse momentum and pseudorapidity, and the relationship between mean transverse momentum and charged-particle multiplicity are measured for events with at least one charged particle in the kinematic range vertical bar eta vertical bar < 2.5 and p(T) > 500 MeV. The measurements are compared to Monte Carlo models of proton-proton collisions and to results from other experiments at the same centre-of-mass energy. The charged-particle multiplicity per event and unit of pseudorapidity eta = 0 is measured to be 1.333 +/- 0.003(stat.) +/- 0.040(syst.), which is 5-15% higher than the Monte Carlo models predict.
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ATLAS Collaboration(Abat, E. et al), Bernabeu Verdu, J., Castillo Gimenez, V., Costa, M. J., Escobar, C., Ferrer, A., et al. (2010). Combined performance studies for electrons at the 2004 ATLAS combined test-beam. J. Instrum., 5, P11006–68pp.
Abstract: In 2004 at the ATLAS (A Toroidal LHC ApparatuS) combined test beam, one slice of the ATLAS barrel detector (including an Inner Detector set-up and the Liquid Argon calorimeter) was exposed to particles from the H8 SPS beam line at CERN. It was the first occasion to test the combined electron performance of ATLAS. This paper presents results obtained for the momentum measurement p with the Inner Detector and for the performance of the electron measurement with the LAr calorimeter (energy E linearity and resolution) in the presence of a magnetic field in the Inner Detector for momenta ranging from 20 GeV/c to 100 GeV/c. Furthermore the particle identification capabilities of the Transition Radiation Tracker, Bremsstrahlungs-recovery algorithms relying on the LAr calorimeter and results obtained for the E/p ratio and a way how to extract scale parameters will be discussed.
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ANTARES Collaboration(Ageron, M. et al), Aguilar, J. A., Bigongiari, C., Carmona, E., Dornic, D., Emanuele, U., et al. (2011). ANTARES: The first undersea neutrino telescope. Nucl. Instrum. Methods Phys. Res. A, 656(1), 11–38.
Abstract: The ANTARES Neutrino Telescope was completed in May 2008 and is the first operational Neutrino Telescope in the Mediterranean Sea. The main purpose of the detector is to perform neutrino astronomy and the apparatus also offers facilities for marine and Earth sciences. This paper describes the design, the construction and the installation of the telescope in the deep sea, offshore from Toulon in France. An illustration of the detector performance is given.
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Oliveira, C. A. B., Sorel, M., Martin-Albo, J., Gomez-Cadenas, J. J., Ferreira, A. L., & Veloso, J. F. C. A. (2011). Energy resolution studies for NEXT. J. Instrum., 6, P05007–13pp.
Abstract: This work aims to present the current state of simulations of electroluminescence (EL) produced in gas-based detectors with special interest for NEXT – Neutrino Experiment with a Xenon TPC. NEXT is a neutrinoless double beta decay experiment, thus needs outstanding energy resolution which can be achieved by using electroluminescence. The process of light production is reviewed and properties such as EL yield and associated fluctuations, excitation and electroluminescence efficiencies, and energy resolution, are calculated. An EL production region with a 5 mm width gap between two infinite parallel planes is considered, where a uniform electric field is produced. The pressure and temperature considered are 10 bar and 293 K, respectively. The results show that, even for low values of VUV photon detection efficiency, good energy resolution can be achieved: below 0.4% (FWHM) at Q(beta beta) = 2.458 MeV.
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ATLAS Collaboration(Aad, G. et al), Amoros, G., Cabrera Urban, S., Castillo Gimenez, V., Costa, M. J., Escobar, C., et al. (2011). Search for heavy long-lived charged particles with the ATLAS detector in pp collisions at sqrt(s)=7 TeV. Phys. Lett. B, 703(4), 428–446.
Abstract: A search for long-lived charged particles reaching the muon spectrometer is performed using a data sample of 37 pb(-1) from pp collisions at sqrt(s) = 7 TeV collected by the ATLAS detector at the LHC in 2010. No excess is observed above the estimated background. Stable (tau) over bar sleptons are excluded at 95% CL up to a mass of 136 GeV, in GMSB models with N(5) = 3 , m(messenger) = 250 TeV, sign(mu) = 1 and tan beta = 5. Electroweak production of sleptons is excluded up to a mass of 110 GeV. Gluino R-hadrons in a generic interaction model are excluded up to masses of 530 GeV to 544 GeV depending on the fraction of R-hadrons produced as (g) over bar -balls.
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Panotopoulos, G. (2011). A dynamical dark energy model with a given luminosity distance. Gen. Relativ. Gravit., 43(11), 3191–3199.
Abstract: It is assumed that the current cosmic acceleration is driven by a scalar field, the Lagrangian of which is a function of the kinetic term only, and that the luminosity distance is a given function of the red-shift. Upon comparison with baryon acoustic oscillations and cosmic microwave background data the parameters of the models are determined, and then the time evolution of the scalar field is determined by the dynamics using the cosmological equations. We find that the solution is very different than the corresponding solution when the non-relativistic matter is ignored, and that the universe enters the acceleration era at larger red-shift compared to the standard I > CDM model.
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