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Author Dorigo, T. et al; Ramos, A.; Ruiz de Austri, R. url  doi
openurl 
  Title Toward the end-to-end optimization of particle physics instruments with differentiable programming Type Journal Article
  Year 2023 Publication Reviews in Physics Abbreviated Journal Rev. Phys.  
  Volume 10 Issue Pages 100085 - pp  
  Keywords (up)  
  Abstract The full optimization of the design and operation of instruments whose functioning relies on the interaction of radiation with matter is a super-human task, due to the large dimensionality of the space of possible choices for geometry, detection technology, materials, data-acquisition, and information-extraction techniques, and the interdependence of the related parameters. On the other hand, massive potential gains in performance over standard, “experience-driven” layouts are in principle within our reach if an objective function fully aligned with the final goals of the instrument is maximized through a systematic search of the configuration space. The stochastic nature of the involved quantum processes make the modeling of these systems an intractable problem from a classical statistics point of view, yet the construction of a fully differentiable pipeline and the use of deep learning techniques may allow the simultaneous optimization of all design parameters.  
  Address  
  Corporate Author Thesis  
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  Notes Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 6096  
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Author Stoppa, F.; Ruiz de Austri, R.; Vreeswijk, P.; Bhattacharyya, S.; Caron, S.; Bloemen, S.; Zaharijas, G.; Principe, G.; Vodeb, V.; Groot, P.J.; Cator, E.; Nelemans, G. url  doi
openurl 
  Title AutoSourceID-FeatureExtractor Optical image analysis using a two-step mean variance estimation network for feature estimation and uncertainty characterisation Type Journal Article
  Year 2023 Publication Astronomy & Astrophysics Abbreviated Journal Astron. Astrophys.  
  Volume 680 Issue Pages A108 - 14pp  
  Keywords (up) astronomical databases: miscellaneous; methods: data analysis; stars: imaging; techniques: image processing  
  Abstract Aims. In astronomy, machine learning has been successful in various tasks such as source localisation, classification, anomaly detection, and segmentation. However, feature regression remains an area with room for improvement. We aim to design a network that can accurately estimate sources' features and their uncertainties from single-band image cutouts, given the approximated locations of the sources provided by the previously developed code AutoSourceID-Light (ASID-L) or other external catalogues. This work serves as a proof of concept, showing the potential of machine learning in estimating astronomical features when trained on meticulously crafted synthetic images and subsequently applied to real astronomical data.Methods. The algorithm presented here, AutoSourceID-FeatureExtractor (ASID-FE), uses single-band cutouts of 32x32 pixels around the localised sources to estimate flux, sub-pixel centre coordinates, and their uncertainties. ASID-FE employs a two-step mean variance estimation (TS-MVE) approach to first estimate the features and then their uncertainties without the need for additional information, for example the point spread function (PSF). For this proof of concept, we generated a synthetic dataset comprising only point sources directly derived from real images, ensuring a controlled yet authentic testing environment.Results. We show that ASID-FE, trained on synthetic images derived from the MeerLICHT telescope, can predict more accurate features with respect to similar codes such as SourceExtractor and that the two-step method can estimate well-calibrated uncertainties that are better behaved compared to similar methods that use deep ensembles of simple MVE networks. Finally, we evaluate the model on real images from the MeerLICHT telescope and the Zwicky Transient Facility (ZTF) to test its transfer learning abilities.  
  Address [Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Groot, P. J.; Nelemans, G.] Radboud Univ Nijmegen, Dept Astrophys, IMAPP, POB 9010, NL-6500 GL Nijmegen, Netherlands, Email: f.stoppa@astro.ru.nl  
  Corporate Author Thesis  
  Publisher Edp Sciences S A Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0004-6361 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:001131898100003 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 5887  
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Author Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Bhattacharyya, S.; Caron, S.; Johannesson, G.; Ruiz de Austri, R.; van den Oetelaar, C.; Zaharijas, G.; Groot, P.J.; Cator, E.; Nelemans, G. url  doi
openurl 
  Title AutoSourceID-Light Fast optical source localization via U-Net and Laplacian of Gaussian Type Journal Article
  Year 2022 Publication Astronomy & Astrophysics Abbreviated Journal Astron. Astrophys.  
  Volume 662 Issue Pages A109 - 8pp  
  Keywords (up) astronomical databases; miscellaneous; methods; data analysis; stars; imaging; techniques; image processing  
  Abstract Aims. With the ever-increasing survey speed of optical wide-field telescopes and the importance of discovering transients when they are still young, rapid and reliable source localization is paramount. We present AutoSourceID-Light (ASID-L), an innovative framework that uses computer vision techniques that can naturally deal with large amounts of data and rapidly localize sources in optical images. Methods. We show that the ASID-L algorithm based on U-shaped networks and enhanced with a Laplacian of Gaussian filter provides outstanding performance in the localization of sources. A U-Net network discerns the sources in the images from many different artifacts and passes the result to a Laplacian of Gaussian filter that then estimates the exact location. Results. Using ASID-L on the optical images of the MeerLICHT telescope demonstrates the great speed and localization power of the method. We compare the results with SExtractor and show that our method outperforms this more widely used method. ASID-L rapidly detects more sources not only in low- and mid-density fields, but particularly in areas with more than 150 sources per square arcminute. The training set and code used in this paper are publicly available.  
  Address [Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Groot, P. J.; Nelemans, G.] Radboud Univ Nijmegen, Dept Astrophys, IMAPP, POB 9010, NL-6500 GL Nijmegen, Netherlands, Email: f.stoppa@astro.ru.nl  
  Corporate Author Thesis  
  Publisher Edp Sciences S A Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0004-6361 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000818665600009 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 5291  
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Author Trotta, R.; Johannesson, G.; Moskalenko, I.V.; Porter, T.A.; Ruiz de Austri, R.; Strong, A.W. url  doi
openurl 
  Title Constraints on Cosmic-Ray Propagation Models from a Global Bayesian Analysis Type Journal Article
  Year 2011 Publication Astrophysical Journal Abbreviated Journal Astrophys. J.  
  Volume 729 Issue 2 Pages 106 - 16pp  
  Keywords (up) astroparticle physics; cosmic rays; diffusion; Galaxy: general; ISM: general; methods: statistical  
  Abstract Research in many areas of modern physics such as, e. g., indirect searches for dark matter and particle acceleration in supernova remnant shocks rely heavily on studies of cosmic rays (CRs) and associated diffuse emissions (radio, microwave, X-rays, gamma-rays). While very detailed numerical models of CR propagation exist, a quantitative statistical analysis of such models has been so far hampered by the large computational effort that those models require. Although statistical analyses have been carried out before using semi-analytical models (where the computation is much faster), the evaluation of the results obtained from such models is difficult, as they necessarily suffer from many simplifying assumptions. The main objective of this paper is to present a working method for a full Bayesian parameter estimation for a numerical CR propagation model. For this study, we use the GALPROP code, the most advanced of its kind, which uses astrophysical information, and nuclear and particle data as inputs to self-consistently predict CRs, gamma-rays, synchrotron, and other observables. We demonstrate that a full Bayesian analysis is possible using nested sampling and Markov Chain Monte Carlo methods (implemented in the SuperBayeS code) despite the heavy computational demands of a numerical propagation code. The best-fit values of parameters found in this analysis are in agreement with previous, significantly simpler, studies also based on GALPROP.  
  Address [Trotta, R.] Univ London Imperial Coll Sci Technol & Med, Astrophys Grp, Blackett Lab, London SW7 2AZ, England  
  Corporate Author Thesis  
  Publisher Iop Publishing Ltd Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0004-637x ISBN Medium  
  Area Expedition Conference  
  Notes ISI:000288608700029 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 541  
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Author Johannesson, G.; Ruiz de Austri, R.; Vincent, A.C.; Moskalenko, I.V.; Orlando, E.; Porter, T.A.; Strong, A.W.; Trotta, R.; Feroz, F.; Graff, P.; Hobson, M.P. url  doi
openurl 
  Title Bayesian analysis of cosmic-ray propagation: evidence against homogeneous diffusion Type Journal Article
  Year 2016 Publication Astrophysical Journal Abbreviated Journal Astrophys. J.  
  Volume 824 Issue 1 Pages 16 - 19pp  
  Keywords (up) astroparticle physics; cosmic rays; diffusion; Galaxy: general; ISM: general; methods: statistical  
  Abstract We present the results of the most complete scan of the parameter space for cosmic ray (CR) injection and propagation. We perform a Bayesian search of the main GALPROP parameters, using the MultiNest nested sampling algorithm, augmented by the BAMBI neural network machine-learning package. This is the first study to separate out low-mass isotopes (p, (p) over bar and He) from the usual light elements (Be, B, C, N, and O). We find that the propagation parameters that best-fit p, (p) over bar, and He data are significantly different from those that fit light elements, including the B/C and Be-10/Be-9 secondary-to-primary ratios normally used to calibrate propagation parameters. This suggests that each set of species is probing a very different interstellar medium, and that the standard approach of calibrating propagation parameters using B/C can lead to incorrect results. We present posterior distributions and best-fit parameters for propagation of both sets of nuclei, as well as for the injection abundances of elements from H to Si. The input GALDEF files with these new parameters will be included in an upcoming public GALPROP update.  
  Address [Johannesson, G.] Univ Iceland, Inst Sci, Dunhaga 3, IS-107 Reykjavik, Iceland  
  Corporate Author Thesis  
  Publisher Iop Publishing Ltd Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0004-637x ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000377937300016 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 2727  
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