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Author |
Albiol, F.; Corbi, A.; Albiol, A. |
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Title |
Geometrical Calibration of X-Ray Imaging With RGB Cameras for 3D Reconstruction |
Type |
Journal Article |
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Year |
2016 |
Publication |
IEEE Transactions on Medical Imaging |
Abbreviated Journal |
IEEE Trans. Med. Imaging |
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Volume |
35 |
Issue |
8 |
Pages |
1952-1961 |
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Keywords  |
3D reconstruction; camera system; geometric calibration; visible fiducials; X-ray imaging |
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Abstract |
We present a methodology to recover the geometrical calibration of conventional X-ray settings with the help of an ordinary video camera and visible fiducials that are present in the scene. After calibration, equivalent points of interest can be easily identifiable with the help of the epipolar geometry. The same procedure also allows the measurement of real anatomic lengths and angles and obtains accurate 3D locations from image points. Our approach completely eliminates the need for X-ray-opaque reference marks (and necessary supporting frames) which can sometimes be invasive for the patient, occlude the radiographic picture, and end up projected outside the imaging sensor area in oblique protocols. Two possible frameworks are envisioned: a spatially shifting X-ray anode around the patient/object and a moving patient that moves/rotates while the imaging system remains fixed. As a proof of concept, experiences with a device under test (DUT), an anthropomorphic phantom and a real brachytherapy session have been carried out. The results show that it is possible to identify common points with a proper level of accuracy and retrieve three-dimensional locations, lengths and shapes with a millimetric level of precision. The presented approach is simple and compatible with both current and legacy widespread diagnostic X-ray imaging deployments and it can represent a good and inexpensive alternative to other radiological modalities like CT. |
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Address |
[Albiol, Francisco; Corbi, Alberto] Univ Valencia, Consejo Super Invest Cient, Inst Fis Corpuscular IFIC, Paterna 46980, Spain, Email: kiko@ific.uv.es; |
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Publisher |
Ieee-Inst Electrical Electronics Engineers Inc |
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Language |
English |
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ISSN |
0278-0062 |
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Conference |
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Notes |
WOS:000381436000016 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
no |
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Call Number |
IFIC @ pastor @ |
Serial |
2781 |
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Author |
Gimenez-Alventosa, V.; Ballester, F.; Vijande, J. |
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Title |
VoxelMages: a general-purpose graphical interface for designing geometries and processing DICOM images for PENELOPE |
Type |
Journal Article |
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Year |
2016 |
Publication |
Applied Radiation And Isotopes |
Abbreviated Journal |
Appl. Radiat. Isot. |
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Volume |
118 |
Issue |
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Pages |
251-257 |
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Keywords |
87.53.Bn; 87.53.Jw; 87.55.Qr; 87.55.km; 87.55.K |
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Abstract |
The design and construction of geometries for Monte Carlo calculations is an error-prone, time-consuming, and complex step in simulations describing particle interactions and transport in the field of medical physics. The software VoxelMages has been developed to help the user in this task. It allows to design complex geometries and to process DICOM image files for simulations with the general-purpose Monte Carlo code PENELOPE in an easy and straightforward way. VoxelMages also allows to import DICOM-RT structure contour information as delivered by a treatment planning system. Its main characteristics, usage and performance benchmarking are described in detail. |
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Address |
[Gimenez-Alventosa, V.; Ballester, F.; Vijande, J.] Univ Valencia, Dept Fis Atom Mol & Nucl, E-46100 Valencia, Spain |
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Publisher |
Pergamon-Elsevier Science Ltd |
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English |
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ISSN |
0969-8043 |
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Notes |
WOS:000390736100039 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
no |
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Call Number |
IFIC @ pastor @ |
Serial |
2904 |
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Author |
LHCb Collaboration (Aaij, R. et al); Martinez-Vidal, F.; Oyanguren, A.; Ruiz Valls, P.; Sanchez Mayordomo, C. |
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Title |
A new algorithm for identifying the flavour of B-s(0) mesons at LHCb |
Type |
Journal Article |
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Year |
2016 |
Publication |
Journal of Instrumentation |
Abbreviated Journal |
J. Instrum. |
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Volume |
11 |
Issue |
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Pages |
P05010 - 23pp |
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Keywords |
Analysis and statistical methods; Particle identification methods; Pattern recognition; cluster finding; calibration and fitting methods |
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Abstract |
A new algorithm for the determination of the initial flavour of B-s(0) mesons is presented. The algorithm is based on two neural networks and exploits the b hadron production mechanism at a hadron collider. The first network is trained to select charged kaons produced in association with the B-s(0) meson. The second network combines the kaon charges to assign the B-s(0) flavour and estimates the probability of a wrong assignment. The algorithm is calibrated using data corresponding to an integrated luminosity of 3 fb(-1) collected by the LHCb experiment in proton-proton collisions at 7 and 8 TeV centre-of-mass energies. The calibration is performed in two ways: by resolving the B-s(0)-B-s(0) flavour oscillations in B-s(0) -> D-s(-)pi(+) decays, and by analysing flavour-specific B-s2*(5840)(0) -> B+K- decays. The tagging power measured in B-s(0) -> D-s(-)pi(+) decays is found to be (1.80 +/- 0.19 ( stat) +/- 0.18 (syst))%, which is an improvement of about 50% compared to a similar algorithm previously used in the LHCb experiment. |
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Address |
[Bediaga, I.; De Miranda, J. M.; Rodrigues, F. Ferreira; Gomes, A.; Massafferri, A.; Rodrigues, B. Osorio; dos Reis, A. C.; Rodrigues, A. B.] CBPF, Rio De Janeiro, Brazil, Email: mirco.dorigo@cern.ch |
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Publisher |
Iop Publishing Ltd |
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Language |
English |
Summary Language |
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Original Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1748-0221 |
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Notes |
WOS:000377851700033 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
2731 |
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Author |
Ayala, C.; Cvetic, G. |
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Title |
anQCD: Fortran programs for couplings at complex momenta in various analytic QCD models |
Type |
Journal Article |
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Year |
2016 |
Publication |
Computer Physics Communications |
Abbreviated Journal |
Comput. Phys. Commun. |
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Volume |
199 |
Issue |
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Pages |
114-117 |
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Keywords |
Analytic (holomorphic) QCD coupling; Fractional Analytic Perturbation Theory; Two-delta analytic QCD model; Massive Perturbation Theory; Perturbative QCD; Renormalization group evolution |
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Abstract |
We provide three Fortran programs which evaluate the QCD analytic (holomorphic) couplings A(v)(Q(2)) for complex or real squared momenta Q(2). These couplings are holomorphic analogs of the powers a(Q(2))(v) of the underlying perturbative QCD (pQCD) coupling a(Q(2)) equivalent to alpha(s)(Q(2))/pi, in three analytic QCD models (anQCD): Fractional Analytic Perturbation Theory (FAPT), Two-delta analytic QCD (2 delta anQCD), and Massive Perturbation Theory (MPT). The index v can be noninteger. The provided programs do basically the same job as the Mathematica package anQCD.m published by us previously (Ayala and Cvetic, 2015), but are now written in Fortran. Program summary Program title: AanQCDext Catalogue identifier: AEYKv10 Program summary URL: http://cpc.cs.qub.ac.uk/summaries/AEYICv1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.: 12105 No. of bytes in distributed program, including test data, etc.: 98822 Distribution format: tar.gz Programming language: Fortran. Computer: Any work-station or PC where Fortran 95/200312008 (gfortran) is running. Operating system: Operating system Linux (Ubuntu and Scientific Linux), Windows (in all cases using gfortran). Classification: 11.1, 11.5. Nature of problem: Calculation of values of the running analytic couplings A(v)(Q(2); N-f) for general complex squared momenta Q(2) equivalent to -q(2), in three analytic QCD models, where A(v)(Q(2); N-f) is the analytic (holomorphic) analog of the power (alpha(s)(Q(2); N-f)/pi)(v). Here, A(v)(Q(2); N-f) is a holomorphic function in the Q(2) complex plane, with the exception of the negative semiaxis (-infinity, -M-thr(2)], reflecting the analyticity properties of the spacelike renormalization invariant quantities D(Q(2)) in QCD. In contrast, the perturbative QCD power (alpha(s)(Q(2); N-f)/pi)(v) has singularities even outside the negative semiaxis (Landau ghosts). The three considered models are: Analytic Perturbation theory (APT); Two-delta analytic QCD (2 delta anQCD); Massive Perturbation Theory (MPT). We refer to Ref. [1] for more details and literature. Solution method: The Fortran programs for FAPT and 2 delta anQCD models contain routines and functions needed to perform two-dimensional numerical integrations involving the spectral function, in order to evaluate A(v)(Q(2)) couplings. In MPT model, one-dimensional numerical integration involving A(1)(Q(2)) is sufficient to evaluate any A(v)(Q(2)) coupling. Restrictions: For unphysical choices of the input parameters the results are meaningless. When Q(2) is close to the cut region of the couplings (Q(2) real negative), the calculations can take more time and can have less precision. Running time: For evaluation of a set of about 10 related couplings, the times vary in the range t similar to 10(1)-10(2) s. MPT requires less time, t similar to 1-10(1) s. References: [1] C. Ayala and G. Cvetic, anQCD: a Mathematica package for calculations in general analytic QCD models, Comput. Phys. Commun. 190 (2015) 182. |
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Address |
[Ayala, Cesar] Univ Valencia, Dept Theoret Phys, E-46100 Valencia, Spain, Email: c.ayala86@gmail.com; |
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Publisher |
Elsevier Science Bv |
Place of Publication |
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English |
Summary Language |
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Original Title |
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Series Editor |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
0010-4655 |
ISBN |
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Conference |
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Notes |
WOS:000367113200012 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
2501 |
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Author |
Johannesson, G.; Ruiz de Austri, R.; Vincent, A.C.; Moskalenko, I.V.; Orlando, E.; Porter, T.A.; Strong, A.W.; Trotta, R.; Feroz, F.; Graff, P.; Hobson, M.P. |
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Title |
Bayesian analysis of cosmic-ray propagation: evidence against homogeneous diffusion |
Type |
Journal Article |
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Year |
2016 |
Publication |
Astrophysical Journal |
Abbreviated Journal |
Astrophys. J. |
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Volume |
824 |
Issue |
1 |
Pages |
16 - 19pp |
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Keywords |
astroparticle physics; cosmic rays; diffusion; Galaxy: general; ISM: general; methods: statistical |
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Abstract |
We present the results of the most complete scan of the parameter space for cosmic ray (CR) injection and propagation. We perform a Bayesian search of the main GALPROP parameters, using the MultiNest nested sampling algorithm, augmented by the BAMBI neural network machine-learning package. This is the first study to separate out low-mass isotopes (p, (p) over bar and He) from the usual light elements (Be, B, C, N, and O). We find that the propagation parameters that best-fit p, (p) over bar, and He data are significantly different from those that fit light elements, including the B/C and Be-10/Be-9 secondary-to-primary ratios normally used to calibrate propagation parameters. This suggests that each set of species is probing a very different interstellar medium, and that the standard approach of calibrating propagation parameters using B/C can lead to incorrect results. We present posterior distributions and best-fit parameters for propagation of both sets of nuclei, as well as for the injection abundances of elements from H to Si. The input GALDEF files with these new parameters will be included in an upcoming public GALPROP update. |
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Address |
[Johannesson, G.] Univ Iceland, Inst Sci, Dunhaga 3, IS-107 Reykjavik, Iceland |
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Publisher |
Iop Publishing Ltd |
Place of Publication |
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Editor |
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Language |
English |
Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
0004-637x |
ISBN |
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Notes |
WOS:000377937300016 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
2727 |
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