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Author Asai, M.; Cortes-Giraldo, M.A.; Gimenez-Alventosa, V.; Gimenez, V.; Salvat, F.
Title The PENELOPE Physics Models and Transport Mechanics. Implementation into Geant4 Type Journal Article
Year 2021 Publication Frontiers in Physics Abbreviated Journal Front. Physics
Volume 9 Issue Pages 738735 - 20pp
Keywords coupled electron-photon transport; Monte Carlo simulation; PENELOPE code system; random-hinge method; Geant4 toolkit
Abstract A translation of the penelope physics subroutines to C++, designed as an extension of the Geant4 toolkit, is presented. The Fortran code system penelope performs Monte Carlo simulation of coupled electron-photon transport in arbitrary materials for a wide energy range, nominally from 50 eV up to 1 GeV. Penelope implements the most reliable interaction models that are currently available, limited only by the required generality of the code. In addition, the transport of electrons and positrons is simulated by means of an elaborate class II scheme in which hard interactions (involving deflection angles or energy transfers larger than pre-defined cutoffs) are simulated from the associated restricted differential cross sections. After a brief description of the interaction models adopted for photons and electrons/positrons, we describe the details of the class-II algorithm used for tracking electrons and positrons. The C++ classes are adapted to the specific code structure of Geant4. They provide a complete description of the interactions and transport mechanics of electrons/positrons and photons in arbitrary materials, which can be activated from the G4ProcessManager to produce simulation results equivalent to those from the original penelope programs. The combined code, named PenG4, benefits from the multi-threading capabilities and advanced geometry and statistical tools of Geant4.
Address [Asai, Makoto] SLAC Natl Accelerator Lab, Menlo Pk, CA USA, Email: miancortes@us.es;
Corporate Author Thesis
Publisher Frontiers Media Sa Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 2296-424x ISBN Medium
Area Expedition Conference
Notes WOS:000742889400001 Approved no
Is ISI yes International Collaboration yes
Call Number (down) IFIC @ pastor @ Serial 5080
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Author Roser, J.; Barrientos, L.; Bernabeu, J.; Borja-Lloret, M.; Muñoz, E.; Ros, A.; Viegas, R.; Llosa, G.
Title Joint image reconstruction algorithm in Compton cameras Type Journal Article
Year 2022 Publication Physics in Medicine and Biology Abbreviated Journal Phys. Med. Biol.
Volume 67 Issue 15 Pages 155009 - 15pp
Keywords Compton camera; compton imaging; hadron therapy; image reconstruction; LM-MLEM; Monte Carlo simulations; multi-layer compton telescope
Abstract Objective. To demonstrate the benefits of using an joint image reconstruction algorithm based on the List Mode Maximum Likelihood Expectation Maximization that combines events measured in different channels of information of a Compton camera. Approach. Both simulations and experimental data are employed to show the algorithm performance. Main results. The obtained joint images present improved image quality and yield better estimates of displacements of high-energy gamma-ray emitting sources. The algorithm also provides images that are more stable than any individual channel against the noisy convergence that characterizes Maximum Likelihood based algorithms. Significance. The joint reconstruction algorithm can improve the quality and robustness of Compton camera images. It also has high versatility, as it can be easily adapted to any Compton camera geometry. It is thus expected to represent an important step in the optimization of Compton camera imaging.
Address [Roser, J.; Barrientos, L.; Bernabeu, J.; Borja-Lloret, M.; Munoz, E.; Ros, A.; Viegas, R.; Llosa, G.] CSIC UV, Inst Fis Corpuscular IFIC, Valencia, Spain, Email: Jorge.Roser@ific.uv.es
Corporate Author Thesis
Publisher IOP Publishing Ltd Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0031-9155 ISBN Medium
Area Expedition Conference
Notes WOS:000827830200001 Approved no
Is ISI yes International Collaboration no
Call Number (down) IFIC @ pastor @ Serial 5298
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Author LHCb Collaboration (Aaij, R. et al); Jashal, B.K.; Martinez-Vidal, F.; Oyanguren, A.; Remon Alepuz, C.; Ruiz Vidal, J.
Title Centrality determination in heavy-ion collisions with the LHCb detector Type Journal Article
Year 2022 Publication Journal of Instrumentation Abbreviated Journal J. Instrum.
Volume 17 Issue 5 Pages P05009 - 31pp
Keywords Pattern recognition; cluster finding; calibration and fitting methods; Performance of High Energy Physics Detectors; Simulation methods and programs
Abstract The centrality of heavy-ion collisions is directly related to the created medium in these interactions. A procedure to determine the centrality of collisions with the LHCb detector is implemented for lead-lead collisions root s(NN) = 5 TeV and lead-neon fixed-target collisions at root s(NN) = 69 GeV. The energy deposits in the electromagnetic calorimeter are used to determine and define the centrality classes. The correspondence between the number of participants and the centrality for the lead-lead collisions is in good agreement with the correspondence found in other experiments, and the centrality measurements for the lead-neon collisions presented here are performed for the first time in fixed-target collisions at the LHC.
Address [Leite, J. Baptista; Bediaga, I; Torres, M. Cruz; De Miranda, J. M.; dos Reis, A. C.; Gomes, A.; Massafferri, A.; Machado, D. Torres] Ctr Brasileiro Pesquisas Fis CBPF, Rio De Janeiro, Brazil
Corporate Author Thesis
Publisher IOP Publishing Ltd Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1748-0221 ISBN Medium
Area Expedition Conference
Notes WOS:000832952600001 Approved no
Is ISI yes International Collaboration yes
Call Number (down) IFIC @ pastor @ Serial 5315
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Author Borys, D. et al; Brzezinski, K.
Title ProTheRaMon-a GATE simulation framework for proton therapy range monitoring using PET imaging Type Journal Article
Year 2022 Publication Physics in Medicine and Biology Abbreviated Journal Phys. Med. Biol.
Volume 67 Issue 22 Pages 224002 - 15pp
Keywords proton therapy; GATE; Monte Carlo simulations; J-PET; medical imaging
Abstract Objective. This paper reports on the implementation and shows examples of the use of the ProTheRaMon framework for simulating the delivery of proton therapy treatment plans and range monitoring using positron emission tomography (PET). ProTheRaMon offers complete processing of proton therapy treatment plans, patient CT geometries, and intra-treatment PET imaging, taking into account therapy and imaging coordinate systems and activity decay during the PET imaging protocol specific to a given proton therapy facility. We present the ProTheRaMon framework and illustrate its potential use case and data processing steps for a patient treated at the Cyclotron Centre Bronowice (CCB) proton therapy center in Krakow, Poland. Approach. The ProTheRaMon framework is based on GATE Monte Carlo software, the CASToR reconstruction package and in-house developed Python and bash scripts. The framework consists of five separated simulation and data processing steps, that can be further optimized according to the user's needs and specific settings of a given proton therapy facility and PET scanner design. Main results. ProTheRaMon is presented using example data from a patient treated at CCB and the J-PET scanner to demonstrate the application of the framework for proton therapy range monitoring. The output of each simulation and data processing stage is described and visualized. Significance. We demonstrate that the ProTheRaMon simulation platform is a high-performance tool, capable of running on a computational cluster and suitable for multi-parameter studies, with databases consisting of large number of patients, as well as different PET scanner geometries and settings for range monitoring in a clinical environment. Due to its modular structure, the ProTheRaMon framework can be adjusted for different proton therapy centers and/or different PET detector geometries. It is available to the community via github (Borys et al 2022).
Address [Borys, Damian] Silesian Tech Univ, Dept Syst Biol & Engn, Gliwice, Poland, Email: damin.borys@polsl.pl
Corporate Author Thesis
Publisher IOP Publishing Ltd Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0031-9155 ISBN Medium
Area Expedition Conference
Notes WOS:000885248200001 Approved no
Is ISI yes International Collaboration no
Call Number (down) IFIC @ pastor @ Serial 5416
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Author Figueroa, D.G.; Florio, A.; Torrenti, F.; Valkenburg, W.
Title CosmoLattice: A modern code for lattice simulations of scalar and gauge field dynamics in an expanding universe Type Journal Article
Year 2023 Publication Computer Physics Communications Abbreviated Journal Comput. Phys. Commun.
Volume 283 Issue Pages 108586 - 13pp
Keywords Early universe; Real-time lattice simulations; Gauge -invariant lattice techniques
Abstract This paper describes CosmoGattice, a modern package for lattice simulations of the dynamics of interacting scalar and gauge fields in an expanding universe. CosmoGattice incorporates a series of features that makes it very versatile and powerful: i) it is written in C++ fully exploiting the object oriented programming paradigm, with a modular structure and a clear separation between the physics and the technical details, ii) it is MPI-based and uses a discrete Fourier transform parallelized in multiple spatial dimensions, which makes it specially appropriate for probing scenarios with well -separated scales, running very high resolution simulations, or simply very long ones, iii) it introduces its own symbolic language, defining field variables and operations over them, so that one can introduce differential equations and operators in a manner as close as possible to the continuum, iv) it includes a library of numerical algorithms, ranging from O(delta t(2)) to O(delta t(10)) methods, suitable for simulating global and gauge theories in an expanding grid, including the case of 'self-consistent' expansion sourced by the fields themselves. Relevant observables are provided for each algorithm (e.g. energy densities, field spectra, lattice snapshots) and we note that, remarkably, all our algorithms for gauge theories (Abelian or non-Abelian) always respect the Gauss constraint to machine precision. Program summary Program Title:: CosmoGattice CPC Library link to program files: https://doi .org /10 .17632 /44vr5xssc6 .1 Developer's repository link: http://github .com /cosmolattice /cosmolattice Licensing provisions: MIT Programming language: C++, MPI Nature of problem: The phenomenology of high energy physics in the early universe is typically characterized by non-linear dynamics, which cannot be captured accurately with analytical techniques. In order to fully understand the non-linearities developed in a given scenario, one needs to carry out lattice simulations. A number of public packages for lattice simulations have appeared over the years, but most of them are only capable of simulating scalar fields. However, realistic models of particle physics do contain other kind of field species, such as (Abelian or non-Abelian) gauge fields, whose non-linear dynamics can also play a relevant role in the early universe. Tensor modes representing gravitational waves are also naturally expected in many scenarios. Solution method: CosmoGattice represents a modern code for lattice simulations of scalar-gauge field theories in an expanding universe. It allows for the simulation of the evolution of interacting (singlet) scalar fields, charged scalar fields under U(1) and/or SU(2) gauge groups, and the corresponding associated Abelian and/or non-Abelian gauge fields. From version 1.1 onward, CosmoGattice also allows to simulate the production of gravitational waves. Simulations can be done either in a flat space-time background, or in a homogeneous and isotropic (spatially flat) expanding FLRW background. CosmoGattice provides symplectic integrators, with accuracy ranging from O (delta t(2)) up to O(delta t(10)), to simuate the non-linear dynamics of the appropriate fields in comoving three-dimensional lattices. The code is parallelized with MPI, and uses a discrete Fourier Transform parallelized in multiple spatial dimensions, which makes it a very powerful code for probing physical problems with well-separated scales. Moreover, the code has been designed as a `platform' to implement any system of dynamical equations suitable for discretization on a lattice.
Address [Figueroa, Daniel G.] CSIC, Inst Fis Corpuscular IFIC, Valencia, Spain, Email: f.torrenti@unibas.ch
Corporate Author Thesis
Publisher Elsevier Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0010-4655 ISBN Medium
Area Expedition Conference
Notes WOS:000899506700008 Approved no
Is ISI yes International Collaboration yes
Call Number (down) IFIC @ pastor @ Serial 5451
Permanent link to this record