Hirn, J., Garcia, J. E., Montesinos-Navarro, A., Sanchez-Martin, R., Sanz, V., & Verdu, M. (2022). A deep Generative Artificial Intelligence system to predict species coexistence patterns. Methods Ecol. Evol., 13, 1052–1061.
Abstract: Predicting coexistence patterns is a current challenge to understand diversity maintenance, especially in rich communities where these patterns' complexity is magnified through indirect interactions that prevent their approximation with classical experimental approaches. We explore cutting-edge Machine Learning techniques called Generative Artificial Intelligence (GenAI) to predict species coexistence patterns in vegetation patches, training generative adversarial networks (GAN) and variational AutoEncoders (VAE) that are then used to unravel some of the mechanisms behind community assemblage. The GAN accurately reproduces real patches' species composition and plant species' affinity to different soil types, and the VAE also reaches a high level of accuracy, above 99%. Using the artificially generated patches, we found that high-order interactions tend to suppress the positive effects of low-order interactions. Finally, by reconstructing successional trajectories, we could identify the pioneer species with larger potential to generate a high diversity of distinct patches in terms of species composition. Understanding the complexity of species coexistence patterns in diverse ecological communities requires new approaches beyond heuristic rules. Generative Artificial Intelligence can be a powerful tool to this end as it allows to overcome the inherent dimensionality of this challenge.
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Johannesson, G., Ruiz de Austri, R., Vincent, A. C., Moskalenko, I. V., Orlando, E., Porter, T. A., et al. (2016). Bayesian analysis of cosmic-ray propagation: evidence against homogeneous diffusion. Astrophys. J., 824(1), 16–19pp.
Abstract: We present the results of the most complete scan of the parameter space for cosmic ray (CR) injection and propagation. We perform a Bayesian search of the main GALPROP parameters, using the MultiNest nested sampling algorithm, augmented by the BAMBI neural network machine-learning package. This is the first study to separate out low-mass isotopes (p, (p) over bar and He) from the usual light elements (Be, B, C, N, and O). We find that the propagation parameters that best-fit p, (p) over bar, and He data are significantly different from those that fit light elements, including the B/C and Be-10/Be-9 secondary-to-primary ratios normally used to calibrate propagation parameters. This suggests that each set of species is probing a very different interstellar medium, and that the standard approach of calibrating propagation parameters using B/C can lead to incorrect results. We present posterior distributions and best-fit parameters for propagation of both sets of nuclei, as well as for the injection abundances of elements from H to Si. The input GALDEF files with these new parameters will be included in an upcoming public GALPROP update.
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Jueid, A., Kip, J., Ruiz de Austri, R., & Skands, P. (2024). The Strong Force meets the Dark Sector: a robust estimate of QCD uncertainties for anti-matter dark matter searches. J. High Energy Phys., 02(2), 119–48pp.
Abstract: In dark-matter annihilation channels to hadronic final states, stable particles – such as positrons, photons, antiprotons, and antineutrinos – are produced via complex sequences of phenomena including QED/QCD radiation, hadronisation, and hadron decays. These processes are normally modelled by Monte Carlo (MC) event generators whose limited accuracy imply intrinsic QCD uncertainties on the predictions for indirect-detection experiments like Fermi-LAT, Pamela, IceCube or Ams-02. In this article, we perform a comprehensive analysis of QCD uncertainties, meaning both perturbative and nonperturbative sources of uncertainty are included – estimated via variations of MC renormalization-scale and fragmentation-function parameters, respectively – in antimatter spectra from dark-matter annihilation, based on parametric variations of the Pythia 8 event generator. After performing several retunings of light-quark fragmentation functions, we define a set of variations that span a conservative estimate of the QCD uncertainties. We estimate the effects on antimatter spectra for various annihilation channels and final-state particle species, and discuss their impact on fitted values for the dark-matter mass and thermally-averaged annihilation cross section. We find dramatic impacts which can go up to O(10%) for the annihilation cross section. We provide the spectra in tabulated form including QCD uncertainties and code snippets to perform fast dark-matter fits, in this github repository.
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Karan, A., Sadhukhan, S., & Valle, J. W. F. (2023). Phenomenological profile of scotogenic fermionic dark matter. J. High Energy Phys., 12(12), 185–34pp.
Abstract: We consider the possibility that neutrino masses arise from the exchange of dark matter states. We examine in detail the phenomenology of fermionic dark matter in the singlet-triplet scotogenic model. We explore the case of singlet-like fermionic dark matter, taking into account all coannihilation effects relevant for determining its relic abundance, such as fermion-fermion and scalar-fermion coannihilation. Although this in principle allows for dark matter below 60 GeV, the latter is in conflict with charged lepton flavour violation (cLFV) and/or collider physics constraints. We examine the prospects for direct dark matter detection in upcoming experiments up to 10 TeV. Fermion-scalar coannihilation is needed to obtain viable fermionic dark matter in the 60-100 GeV mass range. Fermion-fermion and fermion-scalar coannihilation play complementary roles in different parameter regions above 100 GeV.
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Kim, J., Ko, P., & Park, W. I. (2017). Higgs-portal assisted Higgs inflation with a sizeable tensor-to-scalar ratio. J. Cosmol. Astropart. Phys., 02(2), 003–16pp.
Abstract: We show that the Higgs portal interactions involving extra dark Higgs field can save generically the original Higgs inflation of the standard model (SM) from the problem of a deep non-SM vacuum in the SM Higgs potential. Specifically, we show that such interactions disconnect the top quark pole mass from inflationary observables and allow multi-dimensional parameter space to save the Higgs inflation, thanks to the additional parameters (the dark Higgs boson mass m(phi), the mixing angle a between the SM Higgs H and dark Higgs Phi, and the mixed quartic coupling) affecting RG-running of the Higgs quartic coupling. The effect of Higgs portal interactions may lead to a larger tensor-to-scalar ratio, 0.08 less than or similar to r less than or similar to 0.1, by adjusting relevant parameters in wide ranges of alpha and m(phi), some region of which can be probed at future colliders. Performing a numerical analysis we find an allowed region of parameters, matching the latest Planck data.
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KM3NeT Collaboration(Adrian-Martinez, S. et al), Aguilar, J. A., Bigongiari, C., Calvo Diaz-Aldagalan, D., Emanuele, U., Gomez-Gonzalez, J. P., et al. (2013). Expansion cone for the 3-inch PMTs of the KM3NeT optical modules. J. Instrum., 8, T03006–20pp.
Abstract: Detection of high-energy neutrinos from distant astrophysical sources will open a new window on the Universe. The detection principle exploits the measurement of Cherenkov light emitted by charged particles resulting from neutrino interactions in the matter containing the telescope. A novel multi-PMT digital optical module (DOM) was developed to contain 31 3-inch photomultiplier tubes (PMTs). In order to maximize the detector sensitivity, each PMT will be surrounded by an expansion cone which collects photons that would otherwise miss the photocathode. Results for various angles of incidence with respect to the PMT surface indicate an increase in collection efficiency by 30% on average for angles up to 45 degrees with respect to the perpendicular. Ray-tracing calculations could reproduce the measurements, allowing to estimate an increase in the overall photocathode sensitivity, integrated over all angles of incidence, by 27% (for a single PMT). Prototype DOMs, being built by the KM3NeT consortium, will be equipped with these expansion cones.
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KM3NeT Collaboration(Adrian-Martinez, S. et al), Barrios-Marti, J., Calvo, D., Hernandez-Rey, J. J., Illuminati, G., Lotze, M., et al. (2016). A method to stabilise the performance of negatively fed KM3NeT photomultipliers. J. Instrum., 11, P12014–12pp.
Abstract: The KM3NeT research infrastructure, currently under construction in the Mediterranean Sea, will host neutrino telescopes for the identification of neutrino sources in the Universe and for studies of the neutrino mass hierarchy. These telescopes will house hundreds of thousands of photomultiplier tubes that will have to be operated in a stable and reliable fashion. In this context, the stability of the dark counts has been investigated for photomultiplier tubes with negative high voltage on the photocathode and held in insulating support structures made of 3D printed nylon material. Small gaps between the rigid support structure and the photomultiplier tubes in the presence of electric fields can lead to discharges that produce dark count rates that are highly variable. A solution was found by applying the same insulating varnish as used for the high voltage bases directly to the outside of the photomultiplier tubes. This transparent conformal coating provides a convenient and inexpensive method of insulation.
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KM3NeT Collaboration(Aiello, S. et al), Alves Garre, S., Calvo, D., Carretero, V., Colomer, M., Corredoira, I., et al. (2020). gSeaGen: The KM3NeT GENIE-based code for neutrino telescopes. Comput. Phys. Commun., 256, 107477–15pp.
Abstract: The gSeaGen code is a GENIE-based application developed to efficiently generate high statistics samples of events, induced by neutrino interactions, detectable in a neutrino telescope. The gSeaGen code is able to generate events induced by all neutrino flavours, considering topological differences between tracktype and shower-like events. Neutrino interactions are simulated taking into account the density and the composition of the media surrounding the detector. The main features of gSeaGen are presented together with some examples of its application within the KM3NeT project. Program summary Program Title: gSeaGen CPC Library link to program files: http://dx.doi.org/10.17632/ymgxvy2br4.1 Licensing provisions: GPLv3 Programming language: C++ External routines/libraries: GENIE [1] and its external dependencies. Linkable to MUSIC [2] and PROPOSAL [3]. Nature of problem: Development of a code to generate detectable events in neutrino telescopes, using modern and maintained neutrino interaction simulation libraries which include the state-of-the-art physics models. The default application is the simulation of neutrino interactions within KM3NeT [4]. Solution method: Neutrino interactions are simulated using GENIE, a modern framework for Monte Carlo event generators. The GENIE framework, used by nearly all modern neutrino experiments, is considered as a reference code within the neutrino community. Additional comments including restrictions and unusual features: The code was tested with GENIE version 2.12.10 and it is linkable with release series 3. Presently valid up to 5 TeV. This limitation is not intrinsic to the code but due to the present GENIE valid energy range. References: [1] C. Andreopoulos at al., Nucl. Instrum. Meth. A614 (2010) 87. [2] P. Antonioli et al., Astropart. Phys. 7 (1997) 357. [3] J. H. Koehne et al., Comput. Phys. Commun. 184 (2013) 2070. [4] S. Adrian-Martinez et al., J. Phys. G: Nucl. Part. Phys. 43 (2016) 084001.
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KM3NeT Collaboration(Aiello, S. et al), Alves Garre, S., Calvo, D., Carretero, V., Colomer, M., Corredoira, I., et al. (2020). Event reconstruction for KM3NeT/ORCA using convolutional neural networks. J. Instrum., 15(10), P10005–39pp.
Abstract: The KM3NeT research infrastructure is currently under construction at two locations in the Mediterranean Sea. The KM3NeT/ORCA water-Cherenkov neutrino detector off the French coast will instrument several megatons of seawater with photosensors. Its main objective is the determination of the neutrino mass ordering. This work aims at demonstrating the general applicability of deep convolutional neural networks to neutrino telescopes, using simulated datasets for the KM3NeT/ORCA detector as an example. To this end, the networks are employed to achieve reconstruction and classification tasks that constitute an alternative to the analysis pipeline presented for KM3NeT/ORCA in the KM3NeT Letter of Intent. They are used to infer event reconstruction estimates for the energy, the direction, and the interaction point of incident neutrinos. The spatial distribution of Cherenkov light generated by charged particles induced in neutrino interactions is classified as shower- or track-like, and the main background processes associated with the detection of atmospheric neutrinos are recognized. Performance comparisons to machine-learning classification and maximum-likelihood reconstruction algorithms previously developed for KM3NeT/ORCA are provided. It is shown that this application of deep convolutional neural networks to simulated datasets for a large-volume neutrino telescope yields competitive reconstruction results and performance improvements with respect to classical approaches.
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KM3NeT Collaboration(Aiello, S. et al), Alves Garre, S., Calvo, D., Carretero, V., Colomer, M., Garcia Soto, A., et al. (2022). The KM3NeT multi-PMT optical module. J. Instrum., 17(7), P07038–28pp.
Abstract: The optical module of the KM3NeT neutrino telescope is an innovative multi-faceted large area photodetection module. It contains 31 three-inch photomultiplier tubes in a single 0.44 m diameter pressure-resistant glass sphere. The module is a sensory device also comprising calibration instruments and electronics for power, readout and data acquisition. It is capped with a breakout-box with electronics for connection to an electro-optical cable for power and long-distance communication to the onshore control station. The design of the module was qualified for the first time in the deep sea in 2013. Since then, the technology has been further improved to meet requirements of scalability, cost-effectiveness and high reliability. The module features a sub-nanosecond timing accuracy and a dynamic range allowing the measurement of a single photon up to a cascade of thousands of photons, suited for the measurement of the Cherenkov radiation induced in water by secondary particles from interactions of neutrinos with energies in the range of GeV to PeV. A distributed production model has been implemented for the delivery of more than 6000 modules in the coming few years with an average production rate of more than 100 modules per month. In this paper a review is presented of the design of the multi-PMT KM3NeT optical module with a proven effective background suppression and signal recognition and sensitivity to the incoming direction of photons.
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