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Author (up) Aguiar, P.; Rafecas, M.; Ortuño, J.E.; Kontaxakis, G.; Santos, A.; Pavia, J.; Rosetti, M.
Title Geometrical and Monte Carlo projectors in 3D PET reconstruction Type Journal Article
Year 2010 Publication Medical Physics Abbreviated Journal Med. Phys.
Volume 37 Issue 11 Pages 5691-5702
Keywords 3D PET; iterative reconstruction; list-mode reconstruction; ray-tracing techniques; Monte Carlo simulation; system response matrix
Abstract Purpose: In the present work, the authors compare geometrical and Monte Carlo projectors in detail. The geometrical projectors considered were the conventional geometrical Siddon ray-tracer (S-RT) and the orthogonal distance-based ray-tracer (OD-RT), based on computing the orthogonal distance from the center of image voxel to the line-of-response. A comparison of these geometrical projectors was performed using different point spread function (PSF) models. The Monte Carlo-based method under consideration involves an extensive model of the system response matrix based on Monte Carlo simulations and is computed off-line and stored on disk. Methods: Comparisons were performed using simulated and experimental data of the commercial small animal PET scanner rPET. Results: The results demonstrate that the orthogonal distance-based ray-tracer and Siddon ray-tracer using PSF image-space convolutions yield better images in terms of contrast and spatial resolution than those obtained after using the conventional method and the multiray-based S-RT. Furthermore, the Monte Carlo-based method yields slight improvements in terms of contrast and spatial resolution with respect to these geometrical projectors. Conclusions: The orthogonal distance-based ray-tracer and Siddon ray-tracer using PSF image-space convolutions represent satisfactory alternatives to factorizing the system matrix or to the conventional on-the-fly ray-tracing methods for list-mode reconstruction, where an extensive modeling based on Monte Carlo simulations is unfeasible.
Address [Aguiar, Pablo] Univ Santiago de Compostela, Dept Fis Particulas, Complexo Hosp Univ Santiago de Compostela, Fdn IDICHUS IDIS, Santiago De Compostela, Spain, Email: pablo.aguiar.fernandez@sergas.es
Corporate Author Thesis
Publisher Amer Assoc Physicists Medicine Amer Inst Physics Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0094-2405 ISBN Medium
Area Expedition Conference
Notes ISI:000283747600015 Approved no
Is ISI yes International Collaboration no
Call Number IFIC @ elepoucu @ Serial 338
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Author (up) Aiola, S.; Amhis, Y.; Billoir, P.; Jashal, B.K.; Henry, L.; Oyanguren, A.; Marin Benito, C.; Polci, F.; Quagliani, R.; Schiller, M.; Wang, M.
Title Hybrid seeding: A standalone track reconstruction algorithm for scintillating fibre tracker at LHCb Type Journal Article
Year 2021 Publication Computer Physics Communications Abbreviated Journal Comput. Phys. Commun.
Volume 260 Issue Pages 107713 - 5pp
Keywords Track reconstruction; Pattern Recognition; LHCb
Abstract We describe the Hybrid seeding, a stand-alone pattern recognition algorithm aiming at finding charged particle trajectories for the LHCb upgrade. A significant improvement to the charged particle reconstruction efficiency is accomplished by exploiting the knowledge of the LHCb magnetic field and the position of energy deposits in the scintillating fibre tracker detector. Moreover, we achieve a low fake rate and a small contribution to the overall timing budget of the LHCb real-time data processing.
Address [Billoir, P.; Polci, F.; Quagliani, R.] Sorbonne Univ, Paris Diderot Sorbonne Paris Cite, LPNHE, CNRS IN2P3, Paris, France, Email: louis.henry@cern.ch;
Corporate Author Thesis
Publisher Elsevier Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0010-4655 ISBN Medium
Area Expedition Conference
Notes WOS:000608243400007 Approved no
Is ISI yes International Collaboration yes
Call Number IFIC @ pastor @ Serial 4685
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Author (up) Albiol, F.; Corbi, A.; Albiol, A.
Title 3D measurements in conventional X-ray imaging with RGB-D sensors Type Journal Article
Year 2017 Publication Medical Engineering & Physics Abbreviated Journal Med. Eng. Phys.
Volume 42 Issue Pages 73-79
Keywords X-ray; Depth cameras; Epipolar geometry; 3D reconstruction; Movement tracking; Dense surface mapping
Abstract A method for deriving 3D internal information in conventional X-ray settings is presented. It is based on the combination of a pair of radiographs from a patient and it avoids the use of X-ray-opaque fiducials and external reference structures. To achieve this goal, we augment an ordinary X-ray device with a consumer RGB-D camera. The patient' s rotation around the craniocaudal axis is tracked relative to this camera thanks to the depth information provided and the application of a modern surface-mapping algorithm. The measured spatial information is then translated to the reference frame of the X-ray imaging system. By using the intrinsic parameters of the diagnostic equipment, epipolar geometry, and X-ray images of the patient at different angles, 3D internal positions can be obtained. Both the RGB-D and Xray instruments are first geometrically calibrated to find their joint spatial transformation. The proposed method is applied to three rotating phantoms. The first two consist of an anthropomorphic head and a torso, which are filled with spherical lead bearings at precise locations. The third one is made of simple foam and has metal needles of several known lengths embedded in it. The results show that it is possible to resolve anatomical positions and lengths with a millimetric level of precision. With the proposed approach, internal 3D reconstructed coordinates and distances can be provided to the physician. It also contributes to reducing the invasiveness of ordinary X-ray environments and can replace other types of clinical explorations that are mainly aimed at measuring or geometrically relating elements that are present inside the patient's body.
Address [Albiol, Francisco; Corbi, Alberto] Univ Valencia, CSIC, Inst Fis Corpuscular, E-46003 Valencia, Spain, Email: alberto.corbi@ific.uv.es
Corporate Author Thesis
Publisher Elsevier Sci Ltd Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1350-4533 ISBN Medium
Area Expedition Conference
Notes WOS:000398007100008 Approved no
Is ISI yes International Collaboration no
Call Number IFIC @ pastor @ Serial 3043
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Author (up) Albiol, F.; Corbi, A.; Albiol, A.
Title Geometrical Calibration of X-Ray Imaging With RGB Cameras for 3D Reconstruction Type Journal Article
Year 2016 Publication IEEE Transactions on Medical Imaging Abbreviated Journal IEEE Trans. Med. Imaging
Volume 35 Issue 8 Pages 1952-1961
Keywords 3D reconstruction; camera system; geometric calibration; visible fiducials; X-ray imaging
Abstract We present a methodology to recover the geometrical calibration of conventional X-ray settings with the help of an ordinary video camera and visible fiducials that are present in the scene. After calibration, equivalent points of interest can be easily identifiable with the help of the epipolar geometry. The same procedure also allows the measurement of real anatomic lengths and angles and obtains accurate 3D locations from image points. Our approach completely eliminates the need for X-ray-opaque reference marks (and necessary supporting frames) which can sometimes be invasive for the patient, occlude the radiographic picture, and end up projected outside the imaging sensor area in oblique protocols. Two possible frameworks are envisioned: a spatially shifting X-ray anode around the patient/object and a moving patient that moves/rotates while the imaging system remains fixed. As a proof of concept, experiences with a device under test (DUT), an anthropomorphic phantom and a real brachytherapy session have been carried out. The results show that it is possible to identify common points with a proper level of accuracy and retrieve three-dimensional locations, lengths and shapes with a millimetric level of precision. The presented approach is simple and compatible with both current and legacy widespread diagnostic X-ray imaging deployments and it can represent a good and inexpensive alternative to other radiological modalities like CT.
Address [Albiol, Francisco; Corbi, Alberto] Univ Valencia, Consejo Super Invest Cient, Inst Fis Corpuscular IFIC, Paterna 46980, Spain, Email: kiko@ific.uv.es;
Corporate Author Thesis
Publisher Ieee-Inst Electrical Electronics Engineers Inc Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0278-0062 ISBN Medium
Area Expedition Conference
Notes WOS:000381436000016 Approved no
Is ISI yes International Collaboration no
Call Number IFIC @ pastor @ Serial 2781
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Author (up) ANTARES Collaboration (Aguilar, J.A. et al); Bigongiari, C.; Dornic, D.; Emanuele, U.; Gomez-Gonzalez, J.P.; Hernandez-Rey, J.J.; Mangano, S.; Ruiz-Rivas, J.; Salesa, F.; Sanchez-Losa, A.; Toscano, S.; Yepes, H.; Zornoza, J.D.; Zuñiga, J.
Title A method for detection of muon induced electromagnetic showers with the ANTARES detector Type Journal Article
Year 2012 Publication Nuclear Instruments & Methods in Physics Research A Abbreviated Journal Nucl. Instrum. Methods Phys. Res. A
Volume 675 Issue Pages 56-62
Keywords Neutrino telescope; Electromagnetic shower identification; High energy muons; Energy reconstruction
Abstract The primary aim of ANTARES is neutrino astronomy with upward going muons created in charged current muon neutrino interactions in the detector and its surroundings. Downward going muons are background for neutrino searches. These muons are the decay products of cosmic-ray collisions in the Earth's atmosphere far above the detector. This paper presents a method to identify and count electromagnetic showers induced along atmospheric muon tracks with the ANTARES detector. The method is applied to both cosmic muon data and simulations and its applicability to the reconstruction of muon event energies is demonstrated.
Address [Aguilar, J. A.; Bigongiari, C.; Dornic, D.; Emanuele, U.; Gomez-Gonzalez, J. P.; Hernandez-Rey, J. J.; Mangano, S.; Rostovtsev, A.; Ruiz-Rivas, J.; Salesa, F.; Sanchez-Losa, A.; Toscano, S.; Yepes, H.; Zornoza, J. D.; Zuniga, J.] Univ Valencia, IFIC, Inst Fis Corpuscular, CSIC, Valencia 46071, Spain, Email: manganos@ific.uv.es
Corporate Author Thesis
Publisher Elsevier Science Bv Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0168-9002 ISBN Medium
Area Expedition Conference
Notes WOS:000302973600011 Approved no
Is ISI yes International Collaboration yes
Call Number IFIC @ pastor @ Serial 988
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