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Caron, S., Gomez-Vargas, G. A., Hendriks, L., & Ruiz de Austri, R. (2018). Analyzing gamma rays of the Galactic Center with deep learning. J. Cosmol. Astropart. Phys., 05(5), 058–24pp.
Abstract: We present the application of convolutional neural networks to a particular problem in gamma ray astronomy. Explicitly, we use this method to investigate the origin of an excess emission of GeV gamma rays in the direction of the Galactic Center, reported by several groups by analyzing Fermi-LAT data. Interpretations of this excess include gamma rays created by the annihilation of dark matter particles and gamma rays originating from a collection of unresolved point sources, such as millisecond pulsars. We train and test convolutional neural networks with simulated Fermi-LAT images based on point and diffuse emission models of the Galactic Center tuned to measured gamma ray data. Our new method allows precise measurements of the contribution and properties of an unresolved population of gamma ray point sources in the interstellar diffuse emission model. The current model predicts the fraction of unresolved point sources with an error of up to 10% and this is expected to decrease with future work.
Keywords: gamma ray experiments; dark matter simulations
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Campanario, F., & Kubocz, M. (2014). Higgs boson CP-properties of the gluonic contributions in Higgs plus three jet production via gluon fusion at the LHC. J. High Energy Phys., 10(10), 173–16pp.
Abstract: in high energy hadronic collisions, a general CP-violating Higgs boson Phi with accompanying jets can be efficiently produced via gluon fusion, which is mediated by heavy quark loops. In this article, we study the dominant sub-channel gg -> ggg Phi of the gluon fusion production process with triple real emission corrections at order alpha(5)(s). We go beyond the heavy top-quark approximation and include the full mass dependence of the top- and bottom-quark contributions. Furthermore, in a specific model we demonstrate the features of our program and show the impact of bottom-quark loop contributions in combination with large values of tan beta on differential distributions sensitive to CP-rneasurements of the Higgs boson.
Keywords: QCD Phenomenology; Monte Carlo Simulations
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AGATA Collaboration(Akkoyun, S. et al), Algora, A., Barrientos, D., Domingo-Pardo, C., Egea, F. J., Gadea, A., et al. (2012). AGATA-Advanced GAmma Tracking Array. Nucl. Instrum. Methods Phys. Res. A, 668, 26–58.
Abstract: The Advanced GAmma Tracking Array (AGATA) is a European project to develop and operate the next generation gamma-ray spectrometer. AGATA is based on the technique of gamma-ray energy tracking in electrically segmented high-purity germanium crystals. This technique requires the accurate determination of the energy, time and position of every interaction as a gamma ray deposits its energy within the detector volume. Reconstruction of the full interaction path results in a detector with very high efficiency and excellent spectral response. The realisation of gamma-ray tracking and AGATA is a result of many technical advances. These include the development of encapsulated highly segmented germanium detectors assembled in a triple cluster detector cryostat, an electronics system with fast digital sampling and a data acquisition system to process the data at a high rate. The full characterisation of the crystals was measured and compared with detector-response simulations. This enabled pulse-shape analysis algorithms, to extract energy, time and position, to be employed. In addition, tracking algorithms for event reconstruction were developed. The first phase of AGATA is now complete and operational in its first physics campaign. In the future AGATA will be moved between laboratories in Europe and operated in a series of campaigns to take advantage of the different beams and facilities available to maximise its science output. The paper reviews all the achievements made in the AGATA project including all the necessary infrastructure to operate and support the spectrometer.
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Borys, D. et al, & Brzezinski, K. (2022). ProTheRaMon-a GATE simulation framework for proton therapy range monitoring using PET imaging. Phys. Med. Biol., 67(22), 224002–15pp.
Abstract: Objective. This paper reports on the implementation and shows examples of the use of the ProTheRaMon framework for simulating the delivery of proton therapy treatment plans and range monitoring using positron emission tomography (PET). ProTheRaMon offers complete processing of proton therapy treatment plans, patient CT geometries, and intra-treatment PET imaging, taking into account therapy and imaging coordinate systems and activity decay during the PET imaging protocol specific to a given proton therapy facility. We present the ProTheRaMon framework and illustrate its potential use case and data processing steps for a patient treated at the Cyclotron Centre Bronowice (CCB) proton therapy center in Krakow, Poland. Approach. The ProTheRaMon framework is based on GATE Monte Carlo software, the CASToR reconstruction package and in-house developed Python and bash scripts. The framework consists of five separated simulation and data processing steps, that can be further optimized according to the user's needs and specific settings of a given proton therapy facility and PET scanner design. Main results. ProTheRaMon is presented using example data from a patient treated at CCB and the J-PET scanner to demonstrate the application of the framework for proton therapy range monitoring. The output of each simulation and data processing stage is described and visualized. Significance. We demonstrate that the ProTheRaMon simulation platform is a high-performance tool, capable of running on a computational cluster and suitable for multi-parameter studies, with databases consisting of large number of patients, as well as different PET scanner geometries and settings for range monitoring in a clinical environment. Due to its modular structure, the ProTheRaMon framework can be adjusted for different proton therapy centers and/or different PET detector geometries. It is available to the community via github (Borys et al 2022).
Keywords: proton therapy; GATE; Monte Carlo simulations; J-PET; medical imaging
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Borja-Lloret, M., Barrientos, L., Bernabeu, J., Lacasta, C., Muñoz, E., Ros, A., et al. (2023). Influence of the background in Compton camera images for proton therapy treatment monitoring. Phys. Med. Biol., 68(14), 144001–16pp.
Abstract: Objective. Background events are one of the most relevant contributions to image degradation in Compton camera imaging for hadron therapy treatment monitoring. A study of the background and its contribution to image degradation is important to define future strategies to reduce the background in the system. Approach. In this simulation study, the percentage of different kinds of events and their contribution to the reconstructed image in a two-layer Compton camera have been evaluated. To this end, GATE v8.2 simulations of a proton beam impinging on a PMMA phantom have been carried out, for different proton beam energies and at different beam intensities. Main results. For a simulated Compton camera made of Lanthanum (III) Bromide monolithic crystals, coincidences caused by neutrons arriving from the phantom are the most common type of background produced by secondary radiations in the Compton camera, causing between 13% and 33% of the detected coincidences, depending on the beam energy. Results also show that random coincidences are a significant cause of image degradation at high beam intensities, and their influence in the reconstructed images is studied for values of the time coincidence windows from 500 ps to 100 ns. Significance. Results indicate the timing capabilities required to retrieve the fall-off position with good precision. Still, the noise observed in the image when no randoms are considered make us consider further background rejection methods.
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Bernal, N., Forero-Romero, J. E., Garani, R., & Palomares-Ruiz, S. (2014). Systematic uncertainties from halo asphericity in dark matter searches. J. Cosmol. Astropart. Phys., 09(9), 004–30pp.
Abstract: Although commonly assumed to be spherical, dark matter halos are predicted to be non-spherical by N-body simulations and their asphericity has a potential impact on the systematic uncertainties in dark matter searches. The evaluation of these uncertainties is the main aim of this work, where we study the impact of aspherical dark matter density distributions in Milky-Way-like halos on direct and indirect searches. Using data from the large N-body cosmological simulation Bolshoi, we perform a statistical analysis and quantify the systematic uncertainties on the determination of local dark matter density and the so-called J factors for dark matter annihilations and decays from the galactic center. We find that, due to our ignorance about the extent of the non-sphericity of the Milky Way dark matter halo, systematic uncertainties can be as large as 35%, within the 95% most probable region, for a spherically averaged value for the local density of 0.3-0.4 GeV/cm(3). Similarly, systematic uncertainties on the J factors evaluated around the galactic center can be as large as 10% and 15%, within the 95% most probable region, for dark matter annihilations and decays, respectively.
Keywords: dark matter theory; dark matter simulations
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Pierre Auger Collaboration(Abreu, P. et al), & Pastor, S. (2011). Advanced functionality for radio analysis in the Offline software framework of the Pierre Auger Observatory. Nucl. Instrum. Methods Phys. Res. A, 635(1), 92–102.
Abstract: The advent of the Auger Engineering Radio Array (AERA) necessitates the development of a powerful framework for the analysis of radio measurements of cosmic ray air showers. As AERA performs “radio-hybrid” measurements of air shower radio emission in coincidence with the surface particle detectors and fluorescence telescopes of the Pierre Auger Observatory, the radio analysis functionality had to be incorporated in the existing hybrid analysis solutions for fluorescence and surface detector data. This goal has been achieved in a natural way by extending the existing Auger Offline software framework with radio functionality. In this article, we lay out the design, highlights and features of the radio extension implemented in the Auger Offline framework. Its functionality has achieved a high degree of sophistication and offers advanced features such as vectorial reconstruction of the electric field, advanced signal processing algorithms, a transparent and efficient handling of FFTs, a very detailed simulation of detector effects, and the read-in of multiple data formats including data from various radio simulation codes. The source code of this radio functionality can be made available to interested parties on request.
Keywords: Cosmic rays; Radio detection; Analysis software; Detector simulation
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Baran, J. et al, & Brzezinski, K. (2024). Feasibility of the J-PET to monitor the range of therapeutic proton beams. Phys. Medica, 118, 103301–9pp.
Abstract: Purpose: The aim of this work is to investigate the feasibility of the Jagiellonian Positron Emission Tomography (J -PET) scanner for intra-treatment proton beam range monitoring. Methods: The Monte Carlo simulation studies with GATE and PET image reconstruction with CASToR were performed in order to compare six J -PET scanner geometries. We simulated proton irradiation of a PMMA phantom with a Single Pencil Beam (SPB) and Spread -Out Bragg Peak (SOBP) of various ranges. The sensitivity and precision of each scanner were calculated, and considering the setup's cost-effectiveness, we indicated potentially optimal geometries for the J -PET scanner prototype dedicated to the proton beam range assessment. Results: The investigations indicate that the double -layer cylindrical and triple -layer double -head configurations are the most promising for clinical application. We found that the scanner sensitivity is of the order of 10-5 coincidences per primary proton, while the precision of the range assessment for both SPB and SOBP irradiation plans was found below 1 mm. Among the scanners with the same number of detector modules, the best results are found for the triple -layer dual -head geometry. The results indicate that the double -layer cylindrical and triple -layer double -head configurations are the most promising for the clinical application, Conclusions: We performed simulation studies demonstrating that the feasibility of the J -PET detector for PET -based proton beam therapy range monitoring is possible with reasonable sensitivity and precision enabling its pre -clinical tests in the clinical proton therapy environment. Considering the sensitivity, precision and cost-effectiveness, the double -layer cylindrical and triple -layer dual -head J -PET geometry configurations seem promising for future clinical application.
Keywords: PET; Range monitoring; J-PET; Monte Carlo simulations; Proton radiotherapy
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Balaudo, A., Calore, F., De Romeri, V., & Donato, F. (2024). NAJADS: a self-contained framework for the direct determination of astrophysical J-factors. J. Cosmol. Astropart. Phys., 02(2), 001–33pp.
Abstract: Cosmological simulations play a pivotal role in understanding the properties of the dark matter (DM) distribution in both galactic and galaxy -cluster environments. The characterization of DM structures is crucial for informing indirect DM searches, aiming at the detection of the annihilation (or decay) products of DM particles. A fundamental quantity in these analyses is the astrophysical J -factor. In the DM phenomenology community, J -factors are typically computed through the semi -analytical modelling of the DM mass distribution, which is affected by large uncertainties. With the scope of addressing and possibly reducing these uncertainties, we present NAJADS, a self-contained framework to derive the DM J -factor directly from the raw simulations data. We show how this framework can be used to compute all -sky maps of the J -factor, automatically accounting for the complex 3D structure of the simulated halos and for the boosting of the signal due to the density fluctuations along the line of sight. After validating our code, we present a proof -of -concept application of NAJADS to a realistic halo from the IllustrisTNG suite, and exploit it to make a thorough comparison between our numerical approach and traditional semi -analytical methods. JCAP02(2024)001
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NEXT Collaboration(Azevedo, C. D. R. et al), Gomez-Cadenas, J. J., Alvarez, V., Benlloch-Rodriguez, J. M., Botas, A., Carcel, S., et al. (2018). Microscopic simulation of xenon-based optical TPCs in the presence of molecular additives. Nucl. Instrum. Methods Phys. Res. A, 877, 157–172.
Abstract: We introduce a simulation framework for the transport of high and low energy electrons in xenon-based optical time projection chambers (OTPCs). The simulation relies on elementary cross sections (electron-atom and electron-molecule) and incorporates, in order to compute the gas scintillation, the reaction/quenching rates (atom-atom and atom-molecule) of the first 41 excited states of xenon and the relevant associated excimers, together with their radiative cascade. The results compare positively with observations made in pure xenon and its mixtures with CO2 and CF4 in a range of pressures from 0.1 to 10 bar. This work sheds some light on the elementary processes responsible for the primary and secondary xenon-scintillation mechanisms in the presence of additives, that are of interest to the OTPC technology.
Keywords: Optical TPCs; Microscopic simulation; Xenon scintillation
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