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Author |
Oliver, S.; Rodriguez Bosca, S.; Gimenez-Alventosa, V. |
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Title |
Enabling particle transport on CAD-based geometries for radiation simulations with penRed |
Type |
Journal Article |
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Year |
2024 |
Publication |
Computer Physics Communications |
Abbreviated Journal |
Comput. Phys. Commun. |
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Volume |
298 |
Issue |
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Pages |
109091 - 11pp |
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Keywords |
Radiation transport; PENELOPE physics; Monte Carlo simulation; PenRed; CAD; Triangular surface mesh |
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Abstract |
Geometry construction is a fundamental aspect of any radiation transport simulation, regardless of the Monte Carlo code being used. Typically, this process is tedious, time-consuming, and error-prone. The conventional approach involves defining geometries using mathematical objects or surfaces. However, this method comes with several limitations, especially when dealing with complex models, particularly those with organic shapes. Furthermore, since each code employs its own format and methodology for defining geometries, sharing and reproducing simulations among researchers becomes a challenging task. Consequently, many codes have implemented support for simulating over geometries constructed via Computer-Aided Design (CAD) tools. Unfortunately, this feature is lacking in penRed and other PENELOPE physics-based codes. Therefore, the objective of this work is to implement such support within the penRed framework. New version program summary Program Title: Parallel Engine for Radiation Energy Deposition (penRed) CPC Library link to program files: https://doi.org/10.17632/rkw6tvtngy.2 Developer's repository link: https://github.com/PenRed/PenRed Code Ocean capsule: https://codeocean.com/capsule/1041417/tree Licensing provisions: GNU Affero General Public License v3 Programming language: C++ standard 2011. Journal reference of previous version: V. Gimenez-Alventosa, V. Gimenez Gomez, S. Oliver, PenRed: An extensible and parallel Monte-Carlo framework for radiation transport based on PENELOPE, Computer Physics Communications 267 (2021) 108065. doi:https://doi.org/10.1016/j.cpc.2021.108065. Does the new version supersede the previous version?: Yes Reasons for the new version: Implements the capability to simulate on CAD constructed geometries, among many other features and fixes. Summary of revisions: All changes applied through the code versions are summarized in the file CHANGELOG.md in the repository package. Nature of problem: While Monte Carlo codes have proven valuable in simulating complex radiation scenarios, they rely heavily on accurate geometrical representations. In the same way as many other Monte Carlo codes, penRed employs simple geometric quadric surfaces like planes, spheres and cylinders to define geometries. However, since these geometric models offer a certain level of flexibility, these representations have limitations when it comes to simulating highly intricate and irregular shapes. Anatomic structures, for example, require detailed representations of organs, tissues and bones, which are difficult to achieve using basic geometric objects. Similarly, complex devices or intricate mechanical systems may have designs that cannot be accurately represented within the constraints of such geometric models. Moreover, when the complexity of the model increases, geometry construction process becomes more difficult, tedious, time-consuming and error-prone [2]. Also, as each Monte Carlo geometry library uses its own format and construction method, reproducing the same geometry among different codes is a challenging task. Solution method: To face the problems stated above, the objective of this work is to implement the capability to simulate using irregular and adaptable meshed geometries in the penRed framework. This kind of meshes can be constructed using Computer-Aided Design (CAD) tools, the use of which is very widespread and streamline the design process. This feature has been implemented in a new geometry module named “MESH_BODY” specific for this kind of geometries. This one is freely available and usable within the official penRed package1. It can be used since penRed version 1.9.3b and above. |
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Address  |
[Oliver, S.] Univ Politecn Valencia, Inst Seguridad Ind Radiofis & Medioambiental ISIRY, Cami Vera S-N, Valencia 46022, Spain |
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Elsevier |
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English |
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0010-4655 |
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Notes |
WOS:001172840800001 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
6077 |
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Author |
Oliver, S.; Vijande, J.; Tejedor-Aguilar, N.; Miro, R.; Rovira-Escutia, J.J.; Ballester, F.; Juste, B.; Carmona, V.; Felici, G.; Verdu, G.; Sanchis, E.; Conde, A.; Perez-Calatayud, J. |
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Title |
Monte Carlo flattening filter design to high energy intraoperative electron beam homogenization |
Type |
Journal Article |
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Year |
2023 |
Publication |
Radiation Physics and Chemistry |
Abbreviated Journal |
Radiat. Phys. Chem. |
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Volume |
212 |
Issue |
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Pages |
111102 - 6pp |
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Keywords |
Intraoperative radiotherapy; Electron portable LinAc; Flattening filter; Dosimetry; Monte Carlo |
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Abstract |
Intraoperative radiotherapy using mobile linear accelerators is used for a wide variety of malignancies. However, when large fields are used in combination with high energies, a deterioration of the flatness dose profile is measured with respect to smaller fields and lower energies. Indeed, for the LIAC HWL of Sordina, this deterioration is observed for the 12 MeV beam combined with 10 cm (or larger) diameter applicator. Aimed to solve this problem, a flattening filter has been designed and validated evaluating the feasibility of its usage at the upper part of the applicator. The design of the filter was based on Monte Carlo simulations because of its accuracy in modeling components of clinical devices, among other purposes. The LIAC 10 cm diameter applicator was modeled and simulated independently by two different research groups using two different MC codes, reproducing the heterogeneity of the 12 MeV energy beam. Then, an iterative process of filter design was carried out. Finally, the MC designed conical filter with the optimal size and height to obtain the desired flattened beam was built in-house using a 3D printer. During the experimental validation of the applicator-filter, percentage depth dose, beam profiles, absolute and peripheral dose measurements were performed to demonstrate the effectiveness of the filter addition in the applicator. These measurements conclude that the beam has been flattened, from 5.9% with the standard configuration to 1.6% for the configuration with the filter, without significant increase of the peripheral dose. Consequently, the new filter-applicator LIAC configuration can be used also in a conventional surgery room. A reduction of 16% of the output dose and a reduction of 1.1 mm in the D50 of the percentage depth dose was measured with respect to the original configuration. This work is a proof-of-concept that demonstrates that it is possible to add a filter able to flatten the beam delivered by the Sordina LIAC HWL. Future studies will focus on more refined technical solutions fully compatible with the integrity of the applicator, including its sterilization, to be safely introduced in the clinical practice. |
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Address |
[Oliver, S.; Miro, R.; Juste, B.; Verdu, G.] Univ Polite cn Vale ncia, Inst Segur Ind Radiofis & Medioambiental ISIRYM, Cami Vera S-N, Valencia 46022, Spain, Email: gverdu@iqn.upv.es |
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Pergamon-Elsevier Science Ltd |
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English |
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ISSN |
0969-806x |
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Conference |
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Notes |
WOS:001026194900001 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
5578 |
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Author |
Oliver, J.F.; Rafecas, M. |
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Title |
Improving the singles rate method for modeling accidental coincidences in high-resolution PET |
Type |
Journal Article |
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Year |
2010 |
Publication |
Physics in Medicine and Biology |
Abbreviated Journal |
Phys. Med. Biol. |
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Volume |
55 |
Issue |
22 |
Pages |
6951-6971 |
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Keywords |
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Abstract |
Random coincidences ('randoms') are one of the main sources of image degradation in PET imaging. In order to correct for this effect, an accurate method to estimate the contribution of random events is necessary. This aspect becomes especially relevant for high-resolution PET scanners where the highest image quality is sought and accurate quantitative analysis is undertaken. One common approach to estimate randoms is the so-called singles rate method (SR) widely used because of its good statistical properties. SR is based on the measurement of the singles rate in each detector element. However, recent studies suggest that SR systematically overestimates the correct random rate. This overestimation can be particularly marked for low energy thresholds, below 250 keV used in some applications and could entail a significant image degradation. In this work, we investigate the performance of SR as a function of the activity, geometry of the source and energy acceptance window used. We also investigate the performance of an alternative method, which we call 'singles trues' (ST) that improves SR by properly modeling the presence of true coincidences in the sample. Nevertheless, in any real data acquisition the knowledge of which singles are members of a true coincidence is lost. Therefore, we propose an iterative method, STi, that provides an estimation based on ST but which only requires the knowledge of measurable quantities: prompts and singles. Due to inter-crystal scatter, for wide energy windows ST only partially corrects SR overestimations. While SR deviations are in the range 86-300% (depending on the source geometry), the ST deviations are systematically smaller and contained in the range 4-60%. STi fails to reproduce the ST results, although for not too high activities the deviation with respect to ST is only a few percent. For conventional energy windows, i.e. those without inter-crystal scatter, the ST method corrects the SR overestimations, and deviations from the true random rate are of the order of 1% or less. In addition, in the case of conventional energy window STi results reproduce ST results and therefore the former can be used to obtain the true random rate. |
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Address |
[Oliver, Josep F.; Rafecas, Magdalena] Univ Valencia, CSIC, Inst Fis Corpuscular, IFIC, E-46003 Valencia, Spain, Email: josep.f.oliver@uv.es |
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Iop Publishing Ltd |
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English |
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ISSN |
0031-9155 |
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Conference |
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Notes |
ISI:000283789700025 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
no |
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Call Number |
IFIC @ elepoucu @ |
Serial |
344 |
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Author |
Particle Data Group (Olive, K.A. et al); Hernandez-Rey, J.J. |
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Title |
Review of Particle Physics |
Type |
Journal Article |
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Year |
2014 |
Publication |
Chinese Physics C |
Abbreviated Journal |
Chin. Phys. C |
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Volume |
38 |
Issue |
9 |
Pages |
090001 -1658pp |
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Keywords |
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Abstract |
The Review summarizes much of particle physics and cosmology. Using data from previous editions, plus 3,283 new measurements from 899 Japers, we list, evaluate, and average measured properties of gauge bosons and the recently discovered Higgs boson, leptons, quarks, mesons, and baryons. We summarize searches for hypothetical particles such as heavy neutrinos, supersymmetric and technicolor particles, axions, dark photons, etc. All the particle properties and search limits are listed in Summary Tables. We also give numerous tables, figures, formulae, and reviews of topics such as Supersymmetry, Extra Dimensions, Particle Detectors, Probability, and Statistics. Among the 112 reviews are many that are new or heavily revised including those on: Dark Energy, Higgs Boson Physics, Electroweak Model, Neutrino Cross Section Measurements, Monte Carlo Neutrino Generators, Top Quark, Dark Matter, Dynamical Electroweak Symmetry Breaking, Accelerator Physics of Colliders, High-Energy Collider Parameters, Big Bang Nucleosynthesis, Astrophysical Constants and Cosmological Parameters. |
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Address |
[Olive, K. A.; Gherghetta, T.] Univ Minnesota, Sch Phys & Astron, Minneapolis, MN 55455 USA |
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Chinese Physical Soc |
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English |
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ISSN |
1674-1137 |
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Conference |
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Notes |
WOS:000344135900001 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
2010 |
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Author |
Olivares Herrador, J.; Latina, A.; Aksoy, A.; Fuster Martinez, N.; Gimeno, B.; Esperante, D. |
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Title |
Implementation of the beam-loading effect in the tracking code RF-track based on a power-diffusive model |
Type |
Journal Article |
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Year |
2024 |
Publication |
Frontiers in Physics |
Abbreviated Journal |
Front. Physics |
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Volume |
12 |
Issue |
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Pages |
1348042 - 11pp |
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Keywords |
beam loading; LINAC; energy loss; tracking simulation; transient; high-intensity beam; CLEAR; gradient reduction |
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Abstract |
The need to achieve high energies in particle accelerators has led to the development of new accelerator technologies, resulting in higher beam intensities and more compact devices with stronger accelerating fields. In such scenarios, beam-loading effects occur, and intensity-dependent gradient reduction affects the accelerated beam as a consequence of its interaction with the surrounding cavity. In this study, a power-diffusive partial differential equation is derived to account for this effect. Its numerical resolution has been implemented in the tracking code RF-Track, allowing the simulation of apparatuses where transient beam loading plays an important role. Finally, measurements of this effect have been carried out in the CERN Linear Electron Accelerator for Research (CLEAR) facility at CERN, finding good agreement with the RF-Track simulations. |
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Address |
[Olivares Herrador, Javier; Latina, Andrea; Aksoy, Avni] CERN, Meyrin, Switzerland, Email: javier.olivares.herrador@cern.ch |
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Publisher |
Frontiers Media Sa |
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Language |
English |
Summary Language |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
2296-424x |
ISBN |
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Area |
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Expedition |
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Conference |
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Notes |
WOS:001193122800001 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
6019 |
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Author |
Oldengott, I.M.; Barenboim, G.; Kahlen, S.; Salvado, J.; Schwarz, D.J. |
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Title |
How to relax the cosmological neutrino mass bound |
Type |
Journal Article |
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Year |
2019 |
Publication |
Journal of Cosmology and Astroparticle Physics |
Abbreviated Journal |
J. Cosmol. Astropart. Phys. |
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Volume |
04 |
Issue |
4 |
Pages |
049 - 18pp |
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Keywords |
neutrino masses from cosmology; cosmological neutrinos; cosmological parameters from CMBR; cosmological parameters from LSS |
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Abstract |
We study the impact of non-standard momentum distributions of cosmic neutrinos on the anisotropy spectrum of the cosmic microwave background and the matter power spectrum of the large scale structure. We show that the neutrino distribution has almost no unique observable imprint, as it is almost entirely degenerate with the effective number of neutrino flavours, N-eff, and the neutrino mass, m(nu). Performing a Markov chain Monte Carlo analysis with current cosmological data, we demonstrate that the neutrino mass bound heavily depends on the assumed momentum distribution of relic neutrinos. The message of this work is simple and has to our knowledge not been pointed out clearly before: cosmology allows that neutrinos have larger masses if their average momentum is larger than that of a perfectly thermal distribution. Here we provide an example in which the mass limits are relaxed by a factor of two. |
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Address |
[Oldengott, Isabel M.; Barenboim, Gabriela] Univ Valencia, Dept Fis Teor, CSIC, E-46100 Burjassot, Spain, Email: isabel.oldengott@uv.es; |
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Publisher |
Iop Publishing Ltd |
Place of Publication |
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Editor |
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Language |
English |
Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1475-7516 |
ISBN |
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Area |
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Expedition |
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Conference |
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Notes |
WOS:000466578400003 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
4001 |
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Author |
Novella, P. |
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Title |
The antineutrino energy structure in reactor experiments |
Type |
Journal Article |
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Year |
2015 |
Publication |
Advances in High Energy Physics |
Abbreviated Journal |
Adv. High. Energy Phys. |
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Volume |
2015 |
Issue |
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Pages |
364392 - 12pp |
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Keywords |
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Abstract |
The recent observation of an energy structure in the reactor antineutrino spectrum is reviewed. The reactor experiments Daya Bay, Double Chooz, and RENO have reported a consistent excess of antineutrinos deviating from the flux predictions, with a local significance of about 4 sigma between 4 and 6 MeV of the positron energy spectrum. The possible causes of the structure are analyzed in this work, along with the different experimental approaches developed to identify its origin. Considering the available data and results from the three experiments, the most likely explanation concerns the reactor flux predictions and the associated uncertainties. Therefore, the different current models are described and compared. The possible sources of incompleteness or inaccuracy of such models are discussed, as well as the experimental data required to improve their precision. |
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Address |
[Novella, Pau] CSIC, Inst Fis Corpuscular IFIC, Paterna 46980, Spain, Email: pau.novella@ific.uv.es |
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Publisher |
Hindawi Publishing Corp |
Place of Publication |
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Language |
English |
Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1687-7357 |
ISBN |
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Area |
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Conference |
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Notes |
WOS:000367926000001 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
no |
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Call Number |
IFIC @ pastor @ |
Serial |
2531 |
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Author |
Norena, J.; Verde, L.; Barenboim, G.; Bosch, C. |
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Title |
Prospects for constraining the shape of non-Gaussianity with the scale-dependent bias |
Type |
Journal Article |
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Year |
2012 |
Publication |
Journal of Cosmology and Astroparticle Physics |
Abbreviated Journal |
J. Cosmol. Astropart. Phys. |
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Volume |
08 |
Issue |
8 |
Pages |
019 - 16pp |
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Keywords |
redshift surveys; cosmological parameters from LSS; inflation |
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Abstract |
We consider whether the non-Gaussian scale-dependent halo bias can be used not only to constrain the local form of non-Gaussianity but also to distinguish among different shapes. In particular, we ask whether it can constrain the behavior of the primordial three-point function in the squeezed limit where one of the momenta is much smaller than the other two. This is potentially interesting since the observation of a three-point function with a squeezed limit that does not go like the local nor equilateral templates would be a signal of non-trivial dynamics during inflation. To this end we use the quasi-single field inflation model of Chen & Wang [1, 2] as a representative two-parameter model, where one parameter governs the amplitude of non-Gaussianity and the other the shape. We also perform a model-independent analysis by parametrizing the scale-dependent bias as a power-law on large scales, where the power is to be constrained from observations. We find that proposed large-scale structure surveys (with characteristics similar to the dark energy task force stage IV surveys) have the potential to distinguish among the squeezed limit behavior of different bispectrum shapes for a wide range of fiducial model parameters. Thus the halo bias can help discriminate between different models of inflation. |
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Address |
[Norena, Jorge; Verde, Licia] Univ Barcelona ICC UB IEEC, Inst Ciencias Cosmos, Barcelona 08028, Spain, Email: jorge.norena@icc.ub.edu; |
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Corporate Author |
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Publisher |
Iop Publishing Ltd |
Place of Publication |
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Editor |
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Language |
English |
Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1475-7516 |
ISBN |
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Medium |
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Area |
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Expedition |
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Conference |
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Notes |
WOS:000308800700020 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
no |
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Call Number |
IFIC @ pastor @ |
Serial |
1189 |
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Author |
Noguera, S.; Scopetta, S. |
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Title |
Pion transverse momentum dependent parton distributions in the Nambu and Jona-Lasinio model |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of High Energy Physics |
Abbreviated Journal |
J. High Energy Phys. |
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Volume |
11 |
Issue |
11 |
Pages |
102 - 18pp |
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Keywords |
Deep Inelastic Scattering; Phenomenological Models; Chiral Lagrangians |
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Abstract |
An explicit evaluation of the two pion transverse momentum dependent parton distributions at leading twist is presented, in the framework of the Nambu-Jona Lasinio model with Pauli-Villars regularization. The transverse momentum dependence of the obtained distributions is generated solely by the dynamics of the model. Using these results, the so called generalized Boer-Mulders shift is studied and compared with recent lattice data. The obtained agreement is very encouraging, in particular because no additional parameter has been introduced. A more conclusive comparison would require a precise knowledge of the QCD evolution of the transverse momentum dependent parton distributions under scrutiny. |
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Address |
[Noguera, Santiago] Univ Valencia, CSIC, Dept Fis Teor, E-46100 Burjassot, Spain, Email: santiago.noguera@uv.es; |
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Publisher |
Springer |
Place of Publication |
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Language |
English |
Summary Language |
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Original Title |
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Series Editor |
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Series Title |
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Abbreviated Series Title |
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Series Volume |
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Series Issue |
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Edition |
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ISSN |
1029-8479 |
ISBN |
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Medium |
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Area |
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Expedition |
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Conference |
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Notes |
WOS:000365095700007 |
Approved |
no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
2456 |
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Author |
Nieves, J.; Sobczyk, J.E. |
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Title |
In medium dispersion relation effects in nuclear inclusive reactions at intermediate and low energies |
Type |
Journal Article |
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Year |
2017 |
Publication |
Annals of Physics |
Abbreviated Journal |
Ann. Phys. |
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Volume |
383 |
Issue |
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Pages |
455-496 |
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Keywords |
Neutrino-nucleus scattering; Quasielastic mechanism; Spectral function; RPA; Muon capture; Radiative pion capture |
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Abstract |
In a well-established many-body framework, successful in modeling a great variety of nuclear processes, we analyze the role of the spectral functions (SFs) accounting for the modifications of the dispersion relation of nucleons embedded in a nuclear medium. We concentrate in processes mostly governed by one-body mechanisms, and study possible approximations to evaluate the particle hole propagator using SFs. We also investigate how to include together SFs and long-range RPA-correlation corrections in the evaluation of nuclear response functions, discussing the existing interplay between both type of nuclear effects. At low energy transfers (<= 50 MeV), we compare our predictions for inclusive muon and radiative pion captures in nuclei, and charge-current (CC) neutrino-nucleus cross sections with experimental results. We also present an analysis of intermediate energy quasi-elastic neutrino scattering for various targets and both neutrino and antineutrino CC driven processes. In all cases, we pay special attention to estimate the uncertainties affecting the theoretical predictions. In particular, we show that errors on the a,,sigma(mu)/sigma(e) ratio are much smaller than 5%, and also much smaller than the size of the SF+RPA nuclear corrections, which produce significant effects, not only in the individual cross sections, but also in their ratio for neutrino energies below 400 MeV. These latter nuclear corrections, beyond Pauli blocking, turn out to be thus essential to achieve a correct theoretical understanding of this ratio of cross sections of interest for appearance neutrino oscillation experiments. We also briefly compare our SF and RPA results to predictions obtained within other representative approaches. |
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Address |
[Nieves, Juan] Univ Valencia, CSIC,Ctr Mixto, Inst Invest Paterna, Inst Fis Corpuscular IFIC, Apartado 22085, E-46071 Valencia, Spain, Email: jmnieves@ific.uv.es |
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Academic Press Inc Elsevier Science |
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English |
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ISSN |
0003-4916 |
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Notes |
WOS:000407667300025 |
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no |
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Is ISI |
yes |
International Collaboration |
yes |
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Call Number |
IFIC @ pastor @ |
Serial |
3244 |
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