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Author Panes, B.; Eckner, C.; Hendriks, L.; Caron, S.; Dijkstra, K.; Johannesson, G.; Ruiz de Austri, R.; Zaharijas, G. url  doi
openurl 
  Title Identification of point sources in gamma rays using U-shaped convolutional neural networks and a data challenge Type Journal Article
  Year 2021 Publication Astronomy & Astrophysics Abbreviated Journal Astron. Astrophys.  
  Volume 656 Issue Pages A62 - 18pp  
  Keywords catalogs; gamma rays: general; astroparticle physics; methods: numerical; methods: data analysis; techniques: image processing  
  Abstract (down) Context. At GeV energies, the sky is dominated by the interstellar emission from the Galaxy. With limited statistics and spatial resolution, accurately separating point sources is therefore challenging. Aims. Here we present the first application of deep learning based algorithms to automatically detect and classify point sources from gamma-ray data. For concreteness we refer to this approach as AutoSourceID. Methods. To detect point sources, we utilized U-shaped convolutional networks for image segmentation and k-means for source clustering and localization. We also explored the Centroid-Net algorithm, which is designed to find and count objects. Using two algorithms allows for a cross check of the results, while a combination of their results can be used to improve performance. The training data are based on 9.5 years of exposure from The Fermi Large Area Telescope (Fermi-LAT) and we used source properties of active galactic nuclei (AGNs) and pulsars (PSRs) from the fourth Fermi-LAT source catalog in addition to several models of background interstellar emission. The results of the localization algorithm are fed into a classification neural network that is trained to separate the three general source classes (AGNs, PSRs, and FAKE sources). Results. We compared our localization algorithms qualitatively with traditional methods and find them to have similar detection thresholds. We also demonstrate the robustness of our source localization algorithms to modifications in the interstellar emission models, which presents a clear advantage over traditional methods. The classification network is able to discriminate between the three classes with typical accuracy of similar to 70%, as long as balanced data sets are used in classification training. We published online our training data sets and analysis scripts and invite the community to join the data challenge aimed to improve the localization and classification of gamma-ray point sources.  
  Address [Panes, Boris] Pontificia Univ Catolica Chile, Ave Vicuna Mackenna 4860, Macul, Region Metropol, Chile, Email: bapanes@gmail.com  
  Corporate Author Thesis  
  Publisher Edp Sciences S A Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0004-6361 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000725877600001 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 5053  
Permanent link to this record
 

 
Author Ortega, P.G.; Torres-Espallardo, I.; Cerutti, F.; Ferrari, A.; Gillam, J.E.; Lacasta, C.; Llosa, G.; Oliver, J.F.; Sala, P.R.; Solevi, P.; Rafecas, M. doi  openurl
  Title Noise evaluation of Compton camera imaging for proton therapy Type Journal Article
  Year 2015 Publication Physics in Medicine and Biology Abbreviated Journal Phys. Med. Biol.  
  Volume 60 Issue 5 Pages 1845-1863  
  Keywords proton therapy; Compton camera; Monte Carlo methods; FLUKA; prompt gamma; range verification; MLEM  
  Abstract (down) Compton Cameras emerged as an alternative for real-time dose monitoring techniques for Particle Therapy (PT), based on the detection of prompt-gammas. As a consequence of the Compton scattering process, the gamma origin point can be restricted onto the surface of a cone (Compton cone). Through image reconstruction techniques, the distribution of the gamma emitters can be estimated, using cone-surfaces backprojections of the Compton cones through the image space, along with more sophisticated statistical methods to improve the image quality. To calculate the Compton cone required for image reconstruction, either two interactions, the last being photoelectric absorption, or three scatter interactions are needed. Because of the high energy of the photons in PT the first option might not be adequate, as the photon is not absorbed in general. However, the second option is less efficient. That is the reason to resort to spectral reconstructions, where the incoming. energy is considered as a variable in the reconstruction inverse problem. Jointly with prompt gamma, secondary neutrons and scattered photons, not strongly correlated with the dose map, can also reach the imaging detector and produce false events. These events deteriorate the image quality. Also, high intensity beams can produce particle accumulation in the camera, which lead to an increase of random coincidences, meaning events which gather measurements from different incoming particles. The noise scenario is expected to be different if double or triple events are used, and consequently, the reconstructed images can be affected differently by spurious data. The aim of the present work is to study the effect of false events in the reconstructed image, evaluating their impact in the determination of the beam particle ranges. A simulation study that includes misidentified events (neutrons and random coincidences) in the final image of a Compton Telescope for PT monitoring is presented. The complete chain of detection, from the beam particle entering a phantom to the event classification, is simulated using FLUKA. The range determination is later estimated from the reconstructed image obtained from a two and three-event algorithm based on Maximum Likelihood Expectation Maximization. The neutron background and random coincidences due to a therapeutic-like time structure are analyzed for mono-energetic proton beams. The time structure of the beam is included in the simulations, which will affect the rate of particles entering the detector.  
  Address [Ortega, P. G.; Cerutti, F.; Ferrari, A.] CERN European Org Nucl Res, CH-1217 Meyrin, Switzerland, Email: pgarciao@cern.ch  
  Corporate Author Thesis  
  Publisher Iop Publishing Ltd Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0031-9155 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000349530700009 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 2115  
Permanent link to this record
 

 
Author Gammaldi, V.; Zaldivar, B.; Sanchez-Conde, M.A.; Coronado-Blazquez, J. url  doi
openurl 
  Title A search for dark matter among Fermi-LAT unidentified sources with systematic features in machine learning Type Journal Article
  Year 2023 Publication Monthly Notices of the Royal Astronomical Society Abbreviated Journal Mon. Not. Roy. Astron. Soc.  
  Volume 520 Issue 1 Pages 1348-1361  
  Keywords astroparticle physics – methods; data analysis – methods; observational – methods; statistical – dark matter – gamma-rays; general  
  Abstract (down) Around one-third of the point-like sources in the Fermi-LAT catalogues remain as unidentified sources (unIDs) today. Indeed, these unIDs lack a clear, univocal association with a known astrophysical source. If dark matter (DM) is composed of weakly interacting massive particles (WIMPs), there is the exciting possibility that some of these unIDs may actually be DM sources, emitting gamma-rays from WIMPs annihilation. We propose a new approach to solve the standard, machine learning (ML) binary classification problem of disentangling prospective DM sources (simulated data) from astrophysical sources (observed data) among the unIDs of the 4FGL Fermi-LAT catalogue. We artificially build two systematic features for the DM data which are originally inherent to observed data: the detection significance and the uncertainty on the spectral curvature. We do it by sampling from the observed population of unIDs, assuming that the DM distributions would, if any, follow the latter. We consider different ML models: Logistic Regression, Neural Network (NN), Naive Bayes, and Gaussian Process, out of which the best, in terms of classification accuracy, is the NN, achieving around 93 . 3 per cent +/- 0 . 7 per cent performance. Other ML evaluation parameters, such as the True Ne gativ e and True Positive rates, are discussed in our work. Applying the NN to the unIDs sample, we find that the de generac y between some astrophysical and DM sources can be partially solved within this methodology. None the less, we conclude that there are no DM source candidates among the pool of 4FGL Fermi-LAT unIDs.  
  Address [Gammaldi, V; Sanchez-Conde, M. A.; Coronado-Blazquez, J.] Univ Autonoma Madrid, Departamentode Fis Teor, E-28049 Madrid, Spain, Email: viviana.gammaldi@uam.es;  
  Corporate Author Thesis  
  Publisher Oxford Univ Press Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0035-8711 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000937053400014 Approved no  
  Is ISI yes International Collaboration no  
  Call Number IFIC @ pastor @ Serial 5489  
Permanent link to this record
 

 
Author Yepes, H. doi  openurl
  Title The ANTARES neutrino detector instrumentation Type Journal Article
  Year 2012 Publication Journal of Instrumentation Abbreviated Journal J. Instrum.  
  Volume 7 Issue Pages C01022 - 9pp  
  Keywords Large detector-systems performance; Performance of High Energy Physics Detectors; Detector alignment and calibration methods (lasers, sources, particle-beams)  
  Abstract (down) ANTARES is actually the fully operational and the largest neutrino telescope in the Northern hemisphere. Located in the Mediterranean Sea, it consists of a 3D array of 885 photomultiplier tubes (PMTs) arranged in 12 detection lines (25 storeys each), able to detect the Cherenkov light induced by upgoing relativistic muons produced in the interaction of high energy cosmic neutrinos with the detector surroundings. Among its physics goals, the search for neutrino astrophysical sources and the indirect detection of dark matter particles coming from the sun are of particular interest. To reach these goals, good accuracy in track reconstruction is mandatory, so several calibration systems for timing and positioning have been developed. In this contribution we will present the design of the detector, calibration systems, associated equipment and its performance on track reconstruction.  
  Address Univ Valencia, CSIC, Inst Fis Corpuscular IFIC, E-46071 Valencia, Spain, Email: Harold.Yepes@ific.uv.es  
  Corporate Author Thesis  
  Publisher Iop Publishing Ltd Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1748-0221 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000303806200022 Approved no  
  Is ISI yes International Collaboration no  
  Call Number IFIC @ pastor @ Serial 1041  
Permanent link to this record
 

 
Author LHCb Collaboration (Aaij, R. et al); Martinez-Vidal, F.; Oyanguren, A.; Ruiz Valls, P.; Sanchez Mayordomo, C. url  doi
openurl 
  Title B flavour tagging using charm decays at the LHCb experiment Type Journal Article
  Year 2015 Publication Journal of Instrumentation Abbreviated Journal J. Instrum.  
  Volume 10 Issue Pages P10005 - 16pp  
  Keywords Performance of High Energy Physics Detectors; Analysis and statistical methods  
  Abstract (down) An algorithm is described for tagging the flavour content at production of neutral B mesons in the LHCb experiment. The algorithm exploits the correlation of the flavour of a B meson with the charge of a reconstructed secondary charm hadron from the decay of the other b hadron produced in the proton-proton collision. Charm hadron candidates are identified in a number of fully or partially reconstructed Cabibbo-favoured decay modes. The algorithm is calibrated on the self-tagged decay modes B+ -> J/psi K+ and B-0 -> J/psi K*(0) using 3.0fb(-1) of data collected by the LHCb experiment at pp centre-of-mass energies of 7TeV and 8TeV. Its tagging power on these samples of B -> J/psi X decays is (0.30 +/- 0.01 +/- 0.01) %.  
  Address [Bediaga, I.; De Miranda, J. M.; Ferreira Rodrigues, F.; Gomes, A.; Massafferri, A.; Osorio Rodrigues, B.; dos Reis, A. C.; Rodrigues, A. B.] CBPF, Rio De Janeiro, Brazil, Email: jwimberl@cern.ch  
  Corporate Author Thesis  
  Publisher Iop Publishing Ltd Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 1748-0221 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000367674700007 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 2519  
Permanent link to this record
 

 
Author Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Bhattacharyya, S.; Caron, S.; Johannesson, G.; Ruiz de Austri, R.; van den Oetelaar, C.; Zaharijas, G.; Groot, P.J.; Cator, E.; Nelemans, G. url  doi
openurl 
  Title AutoSourceID-Light Fast optical source localization via U-Net and Laplacian of Gaussian Type Journal Article
  Year 2022 Publication Astronomy & Astrophysics Abbreviated Journal Astron. Astrophys.  
  Volume 662 Issue Pages A109 - 8pp  
  Keywords astronomical databases; miscellaneous; methods; data analysis; stars; imaging; techniques; image processing  
  Abstract (down) Aims. With the ever-increasing survey speed of optical wide-field telescopes and the importance of discovering transients when they are still young, rapid and reliable source localization is paramount. We present AutoSourceID-Light (ASID-L), an innovative framework that uses computer vision techniques that can naturally deal with large amounts of data and rapidly localize sources in optical images. Methods. We show that the ASID-L algorithm based on U-shaped networks and enhanced with a Laplacian of Gaussian filter provides outstanding performance in the localization of sources. A U-Net network discerns the sources in the images from many different artifacts and passes the result to a Laplacian of Gaussian filter that then estimates the exact location. Results. Using ASID-L on the optical images of the MeerLICHT telescope demonstrates the great speed and localization power of the method. We compare the results with SExtractor and show that our method outperforms this more widely used method. ASID-L rapidly detects more sources not only in low- and mid-density fields, but particularly in areas with more than 150 sources per square arcminute. The training set and code used in this paper are publicly available.  
  Address [Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Groot, P. J.; Nelemans, G.] Radboud Univ Nijmegen, Dept Astrophys, IMAPP, POB 9010, NL-6500 GL Nijmegen, Netherlands, Email: f.stoppa@astro.ru.nl  
  Corporate Author Thesis  
  Publisher Edp Sciences S A Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0004-6361 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000818665600009 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 5291  
Permanent link to this record
 

 
Author ANTARES Collaboration (Adrian-Martinez, S. et al); Barrios-Marti, J.; Bigongiari, C.; Emanuele, U.; Gomez-Gonzalez, J.P.; Hernandez-Rey, J.J.; Lambard, G.; Mangano, S.; Sanchez-Losa, A.; Yepes, H.; Zornoza, J.D.; Zuñiga, J. url  doi
openurl 
  Title Search for muon neutrinos from gamma-ray bursts with the ANTARES neutrino telescope using 2008 to 2011 data Type Journal Article
  Year 2013 Publication Astronomy & Astrophysics Abbreviated Journal Astron. Astrophys.  
  Volume 559 Issue Pages A9 - 11pp  
  Keywords neutrinos; gamma-ray burst: general; methods: numerical  
  Abstract (down) Aims. We search for muon neutrinos in coincidence with GRBs with the ANTARES neutrino detector using data from the end of 2007 to 2011. Methods. Expected neutrino fluxes were calculated for each burst individually. The most recent numerical calculations of the spectra using the NeuCosmA code were employed, which include Monte Carlo simulations of the full underlying photohadronic interaction processes. The discovery probability for a selection of 296 GRBs in the given period was optimised using an extended maximum-likelihood strategy. Results. No significant excess over background is found in the data, and 90% confidence level upper limits are placed on the total expected flux according to the model.  
  Address [Adrian-Martinez, S.; Ardid, M.; Larosa, G.; Martinez-Mora, J. A.] Univ Politecn Valencia, Inst Invest Gestio Integrada Zones Costaneres IGI, Gandia 46730, Spain, Email: criviere@cppm.in2p3.fr;  
  Corporate Author Thesis  
  Publisher Edp Sciences S A Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0004-6361 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000327847200009 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 1691  
Permanent link to this record
 

 
Author Stoppa, F.; Bhattacharyya, S.; Ruiz de Austri, R.; Vreeswijk, P.; Caron, S.; Zaharijas, G.; Bloemen, S.; Principe, G.; Malyshev, D.; Vodeb, V.; Groot, P.J.; Cator, E.; Nelemans, G. url  doi
openurl 
  Title AutoSourceID-Classifier Star-galaxy classification using a convolutional neural network with spatial information Type Journal Article
  Year 2023 Publication Astronomy & Astrophysics Abbreviated Journal Astron. Astrophys.  
  Volume 680 Issue Pages A109 - 16pp  
  Keywords methods: data analysis; techniques: image processing; astronomical databases: miscellaneous; stars: imaging; Galaxies: statistics  
  Abstract (down) Aims. Traditional star-galaxy classification techniques often rely on feature estimation from catalogs, a process susceptible to introducing inaccuracies, thereby potentially jeopardizing the classification's reliability. Certain galaxies, especially those not manifesting as extended sources, can be misclassified when their shape parameters and flux solely drive the inference. We aim to create a robust and accurate classification network for identifying stars and galaxies directly from astronomical images.Methods. The AutoSourceID-Classifier (ASID-C) algorithm developed for this work uses 32x32 pixel single filter band source cutouts generated by the previously developed AutoSourceID-Light (ASID-L) code. By leveraging convolutional neural networks (CNN) and additional information about the source position within the full-field image, ASID-C aims to accurately classify all stars and galaxies within a survey. Subsequently, we employed a modified Platt scaling calibration for the output of the CNN, ensuring that the derived probabilities were effectively calibrated, delivering precise and reliable results.Results. We show that ASID-C, trained on MeerLICHT telescope images and using the Dark Energy Camera Legacy Survey (DECaLS) morphological classification, is a robust classifier and outperforms similar codes such as SourceExtractor. To facilitate a rigorous comparison, we also trained an eXtreme Gradient Boosting (XGBoost) model on tabular features extracted by SourceExtractor. While this XGBoost model approaches ASID-C in performance metrics, it does not offer the computational efficiency and reduced error propagation inherent in ASID-C's direct image-based classification approach. ASID-C excels in low signal-to-noise ratio and crowded scenarios, potentially aiding in transient host identification and advancing deep-sky astronomy.  
  Address [Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Groot, P. J.; Nelemans, G.] Radboud Univ Nijmegen, Dept Astrophys IMAPP, POB 9010, NL-6500 GL Nijmegen, Netherlands, Email: f.stoppa@astro.ru.nl  
  Corporate Author Thesis  
  Publisher Edp Sciences S A Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0004-6361 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:001131898100001 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 5888  
Permanent link to this record
 

 
Author Stoppa, F.; Ruiz de Austri, R.; Vreeswijk, P.; Bhattacharyya, S.; Caron, S.; Bloemen, S.; Zaharijas, G.; Principe, G.; Vodeb, V.; Groot, P.J.; Cator, E.; Nelemans, G. url  doi
openurl 
  Title AutoSourceID-FeatureExtractor Optical image analysis using a two-step mean variance estimation network for feature estimation and uncertainty characterisation Type Journal Article
  Year 2023 Publication Astronomy & Astrophysics Abbreviated Journal Astron. Astrophys.  
  Volume 680 Issue Pages A108 - 14pp  
  Keywords astronomical databases: miscellaneous; methods: data analysis; stars: imaging; techniques: image processing  
  Abstract (down) Aims. In astronomy, machine learning has been successful in various tasks such as source localisation, classification, anomaly detection, and segmentation. However, feature regression remains an area with room for improvement. We aim to design a network that can accurately estimate sources' features and their uncertainties from single-band image cutouts, given the approximated locations of the sources provided by the previously developed code AutoSourceID-Light (ASID-L) or other external catalogues. This work serves as a proof of concept, showing the potential of machine learning in estimating astronomical features when trained on meticulously crafted synthetic images and subsequently applied to real astronomical data.Methods. The algorithm presented here, AutoSourceID-FeatureExtractor (ASID-FE), uses single-band cutouts of 32x32 pixels around the localised sources to estimate flux, sub-pixel centre coordinates, and their uncertainties. ASID-FE employs a two-step mean variance estimation (TS-MVE) approach to first estimate the features and then their uncertainties without the need for additional information, for example the point spread function (PSF). For this proof of concept, we generated a synthetic dataset comprising only point sources directly derived from real images, ensuring a controlled yet authentic testing environment.Results. We show that ASID-FE, trained on synthetic images derived from the MeerLICHT telescope, can predict more accurate features with respect to similar codes such as SourceExtractor and that the two-step method can estimate well-calibrated uncertainties that are better behaved compared to similar methods that use deep ensembles of simple MVE networks. Finally, we evaluate the model on real images from the MeerLICHT telescope and the Zwicky Transient Facility (ZTF) to test its transfer learning abilities.  
  Address [Stoppa, F.; Vreeswijk, P.; Bloemen, S.; Groot, P. J.; Nelemans, G.] Radboud Univ Nijmegen, Dept Astrophys, IMAPP, POB 9010, NL-6500 GL Nijmegen, Netherlands, Email: f.stoppa@astro.ru.nl  
  Corporate Author Thesis  
  Publisher Edp Sciences S A Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0004-6361 ISBN Medium  
  Area Expedition Conference  
  Notes WOS:001131898100003 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 5887  
Permanent link to this record
 

 
Author Pierre Auger Collaboration (Abreu, P. et al); Pastor, S. url  doi
openurl 
  Title A search for point sources of EeV neutrons Type Journal Article
  Year 2012 Publication Astrophysical Journal Abbreviated Journal Astrophys. J.  
  Volume 760 Issue 2 Pages 148 - 11pp  
  Keywords cosmic rays; Galaxy: disk; methods: data analysis  
  Abstract (down) A thorough search of the sky exposed at the Pierre Auger Cosmic Ray Observatory reveals no statistically significant excess of events in any small solid angle that would be indicative of a flux of neutral particles from a discrete source. The search covers from -90 degrees to +15 degrees in declination using four different energy ranges above 1 EeV (10(18) eV). The method used in this search is more sensitive to neutrons than to photons. The upper limit on a neutron flux is derived for a dense grid of directions for each of the four energy ranges. These results constrain scenarios for the production of ultrahigh energy cosmic rays in the Galaxy.  
  Address [Abreu, P.; Andringa, S.; Assis, P.; Brogueira, P.; Cazon, L.; Conceicao, R.; Diogo, F.; Espadanal, J.; Goncalves, P.; Pimenta, M.; Santo, C. E.; Santos, E.; Tome, B.] Univ Tecn Lisboa, LIP, Lisbon, Portugal  
  Corporate Author Thesis  
  Publisher Iop Publishing Ltd Place of Publication Editor  
  Language English Summary Language Original Title  
  Series Editor Series Title Abbreviated Series Title  
  Series Volume Series Issue Edition  
  ISSN 0004-637x ISBN Medium  
  Area Expedition Conference  
  Notes WOS:000311217000052 Approved no  
  Is ISI yes International Collaboration yes  
  Call Number IFIC @ pastor @ Serial 1218  
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